FMO02630.5prime Sequence
1203 bp (475 high quality bases) assembled on 2008-05-23
> FMO02630.5prime
CAGTCCACATGACGACGGCCGTGCTGGGAGGCGGATTGAGTGGACTATCC
GCCGGATACTACCTGTTGCGGCGATTCGGGAAGCCGCTGACCATCTACGA
TGCCTCGCCCCGTGTGGGCGGATGGGTGCGGTCGGAGAATCGCAAGGATC
GCAACTTCATCTTCGAGAGCGGACCGCGAACCATACGCCCAGTTGGTGAG
CCAGGTGCCAATACGCTAGAATTGGTGGAGGATCTGAAGCTGGAGGTGAC
TCCCATTCGACGCAGTCATGTCACAACACGCAACCGAATGCTGTATGCCA
AGGGACAGCTCTGCATGCTGCCCAACAGTCCCAAGGGTCTCTTCGGCGTC
CTGCCTCCCTTCACGAAGCCGCTATACAAAGCGGTTCTTCGCGATCTGTT
CACAGCAAGCAAGAAAGCGAAGCTGGAGGATGAGAGCATCTACAGTTTCG
CTGAGCGGCGGTTTGGTAAGGAGATAGCCGACTACGCCATCAGTCCCATG
ATCTGCGGTATTTGCGCCGGTGACGCGCGAGAAATAAGTGTGCGCTTCCT
GATGGAGGGGCTCTTTGAAAAGGAACAGAAGTACGGAGGAGTGCTCAAGG
GCACACTCATTTCCCGCTTTGAGAAGAACAAGACCAAGGACACCAAGGAT
GGACTATTTGCCGAAAGACAGCCCAAGCTGTATGCGCAGGCGGTAAAGGA
GAAGTGGGCCATGTACGGGCTGAAAGGCGGTCTGGAGAACCTACCCAAAC
TATGCGAAAGTACTTATGTGAGCGGGATGTGAACGTGCAGCTAAGCAACG
AATGCCAGAACCTGACCTTCTGCAGCTCCGGGATCGAATGAACATCAAAG
ATGCCCAAGTTCCCGGTGGAGCATGTGGTCAGCTCCCTGCCCGCCTACGA
ACTCGCGCCCCTGGTAAAGCAGCAGCATCCCTCGCTGAACGCCCACTATG
GAGCATTCCGTACGTGCATGTGCTGGTAGTGACATGCAGCTCCCCGGCTA
GCTAATTAACAGACCGCTTTGGATTGCTAGTGCCGTCGATGAAATGTTAC
CTCTGCTCGCGTCCATCTCGAACCGCCTGACTGCCTCGACATGGGCAGTA
CCCTGTGCTACGTGATGATCTTGCATAGTCGACTGCTTCGGTATCGTCAG
ACCCAGCCAATCTGTACTCGACCGCCACAAGTTGTACCATATCGTCGCGA
ACT
FMO02630.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ppox-RA | 1655 | CG5796-RA | 126..1244 | 8..1119 | 4790 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24660669..24661726 | 1059..8 | 4570 | 97 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:13:50 has no hits.
FMO02630.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:46:48 Download gff for
FMO02630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5796-RA | 120..1200 | 1..1076 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:18 Download gff for
FMO02630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ppox-RA | 120..1200 | 1..1076 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:43 Download gff for
FMO02630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ppox-RA | 120..1200 | 1..1076 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:43 Download gff for
FMO02630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24660652..24661731 | 1..1076 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:18 Download gff for
FMO02630.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20486374..20487453 | 1..1076 | 96 | | Minus |
