FMO02635.5prime Sequence
1208 bp (996 high quality bases) assembled on 2008-05-23
> FMO02635.5prime
CAGTCGACATGGCTGCCGAGATAAAACCAGCTCAGCGGACCAACAATGAT
CGCTTTAACACCTCCAAAAAGCCGGAATTGCTGAGTAAGCTGGAGGGCAG
CAGCGACGATGTGAACGCAGCGATCCTAATTCCGGGCGAAAACGGCGTAA
TTAGCGTTTCCGATGACAAAACCGTTCGCGTTTGGCTAAAACGCGATTCT
GGTCAATATTGGCCTAGCATTTGCCAGTATATGCCTTCCGGCTGCACGGC
CATCGAGTACGTTTCGGAATCCCGGCACCTGTACGTCGGCCAGGAAAACG
GAACGGTCACCCAGTACGCGCTATCCGAAGACTGCAATCGCCTGTCCTTC
CTGCGGGATTACTTGTCCCATCAAGCGCGGGTCATGGCCGTGGTCTTCTC
GAAAACCCACAAGTGGATACTCTCCGCCGGCAAAGATAAGCAGTTCGCCT
ATCATTGCACGGAGAGCGGCAAACGGGTGGGCGGATACAACTTTGAGACA
CCATGCACGGCTCTCCAGTTCGACGCTTTGGCCAAGTATGCCTTTGTGGG
CGATCATGCTGGACAGATAACAATGCTAAGGTGCGATGTTCAGGGAGTGC
AACTAATTACCACTTTCAATGGACATTCGGCGGAAATCCGGTGCCTCAAA
TGGGTGGAAGGCCCTCAGCTCTTGTTTAGCGGAGCTTGCGATCAGTCCGT
GCTAGTTTGGGATGTTGGTGGCAAACGTGGCACCATTTACGAGCTGCAGG
GACATAGCAACAAAGTTTCCGCCCTGTCGTACGCGAATCACACGCAACAA
CTGATAAGCTGTGCCGAAGATTCAGTAGTGGTTTTTTGGGAAATGAATGC
AATGCGGAAAGAGGTTCCTGGCTGGGTGGATACAACAACTGTCAGCTTTG
CTCCAGGCCCTTCTTCTGGAACTTCCGCTCATGATGGATCAAAGCAGCTG
GAATACGACAGCATCAATGTCGCCACTGCGCCAAGCCGTGTGCGACAACT
GTCCACCATCGCATTACATACCAATAATGGGCTTCGAGTTGATGTGCGAC
CTGTGATCGTGCTACAACAACTTCGAAAGTCAGCGCTCCCTCGCTTGGCT
TCCATTCATGACGCTAGCATTCGATCGTCTACATGAACTTGACAGGTCGA
GGCCTGTTGAAGTGGGGCAGGAAGGTATCTAATATCGGATCTTCTCAATC
ATCGTGGG
FMO02635.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5168-RB | 1584 | CG5168-RB | 148..1287 | 9..1135 | 5150 | 97.8 | Plus |
| CG5168-RA | 1623 | CG5168-RA | 187..1326 | 9..1135 | 5150 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10423751..10424100 | 170..519 | 1750 | 100 | Plus |
| 2L | 23513712 | 2L | 10424731..10424921 | 755..943 | 840 | 98.4 | Plus |
| 2L | 23513712 | 2L | 10423520..10423680 | 9..169 | 805 | 100 | Plus |
| 2L | 23513712 | 2L | 10424543..10424670 | 630..757 | 640 | 100 | Plus |
| 2L | 23513712 | 2L | 10424371..10424483 | 518..630 | 565 | 100 | Plus |
| 2L | 23513712 | 2L | 10424991..10425085 | 950..1040 | 230 | 92.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:23:42 has no hits.
FMO02635.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:46:39 Download gff for
FMO02635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5168-RA | 206..1358 | 9..1146 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:20 Download gff for
FMO02635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5168-RA | 187..1339 | 9..1146 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:56 Download gff for
FMO02635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5168-RA | 187..1339 | 9..1146 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:56 Download gff for
FMO02635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10423520..10423680 | 9..169 | 100 | -> | Plus |
| 2L | 10423751..10424098 | 170..517 | 100 | -> | Plus |
| 2L | 10424371..10424483 | 518..630 | 100 | -> | Plus |
| 2L | 10424544..10424670 | 631..757 | 100 | -> | Plus |
| 2L | 10424734..10424930 | 758..950 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:20 Download gff for
FMO02635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10423520..10423680 | 9..169 | 100 | -> | Plus |
| arm_2L | 10423751..10424098 | 170..517 | 100 | -> | Plus |
| arm_2L | 10424371..10424483 | 518..630 | 100 | -> | Plus |
| arm_2L | 10424544..10424670 | 631..757 | 100 | -> | Plus |
| arm_2L | 10424734..10424930 | 758..950 | 97 | -> | Plus |
