FMO02641.5prime Sequence
611 bp (611 high quality bases) assembled on 2008-05-23
> FMO02641.5prime
CAGTCGACATGGTTTTGACGAACTTCGAGTGCTGGGCACATGGTGATCCG
TCGTCGTCGGCGGCCGCCACTTTCGAAACTGGAGCGCTGCGTCCTTCGAT
GGATCCGTTCAATCCACGCGCCGTCACCTTCATGACCGACGCCAACAACA
ACAACAACAACAATGATGGCAATAACCTCGCGGCACAACCGATGCCGGTC
GTCCTGCCTCCGGAAGTCCTGCGCTGCAAGAAGCGCCTGAATCCCGGTCA
CAATCCTGTCGGGGATTTGGACACGGACCAACCGGTGTACACCAAGAGAT
GTCGCTACGACGAGTCTGACTTGGCCGCCCAGTACTGCAATGATTTCTTT
TCCTTGCCTGCCACACAAATAATTGGAACGCAGGCCTCTTTGATGGATTA
CGAGATGCAGGCCACCGGCGGCATGATGATGATGGAATCGGAGACGAGTT
TTCCAGCGCAGCAGCAGCAACATCAAGAGCAACAGCAACATCCACAGCAG
CCACATCAATATCAGCGCATTCATCAGCATTATCAAGGTCATTTGCATCG
CGCCAACCGTGATGTGAGTCGTTGCATGATGTCGCACATGATTGCAAGCT
TTCTAGACCAT
FMO02641.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32428-RB | 1804 | CG32428-RB | 345..929 | 9..593 | 2925 | 100 | Plus |
| CG32428-RA | 1213 | CG32428-RA | 399..983 | 9..593 | 2925 | 100 | Plus |
| CG32428-RC | 1238 | CG32428-RC | 399..927 | 9..537 | 2645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20472641..20472974 | 342..9 | 1670 | 100 | Minus |
| 3L | 28110227 | 3L | 20470898..20471149 | 593..342 | 1260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:22:15 has no hits.
FMO02641.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:47:04 Download gff for
FMO02641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32428-RA | 369..959 | 1..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:35 Download gff for
FMO02641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32428-RA | 393..983 | 1..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:37 Download gff for
FMO02641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32428-RA | 393..983 | 1..593 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:37 Download gff for
FMO02641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20470898..20471148 | 343..593 | 100 | <- | Minus |
| 3L | 20472641..20472978 | 1..342 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:35 Download gff for
FMO02641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20463998..20464248 | 343..593 | 100 | <- | Minus |
| arm_3L | 20465741..20466078 | 1..342 | 98 | | Minus |
