FMO02649.5prime Sequence
1169 bp (1014 high quality bases) assembled on 2008-05-23
> FMO02649.5prime
CAGTCGACATGCCCGTGCTGCCGATGCCACCACTCATGCAGAACGCCGTG
GAGCCGATGCAAGTGGACATCGCGCCGCCGAACGAGGACAACGAAAACAA
CGAGGAGCAGCAGATTGTGGTGGAGAACCCCAGCATCGATCTCGAAGTGT
ACGCCAACCAATATGCCGGGATCGTGCGGCTCCATCGCCTAATTTATGTG
GCGGACGTCTGCCCGGTTTTAGCCGTGGAGGCTCTGAAAATGGCCATTAC
TTACGTTCAAACCACCTACAACGTAAATCTCTACCAAGTGCTGCACAAGC
GCTTGAGTGATCTAAACGCTGGAAATGCGCCTGCGCCACCAGCAAATGCT
GGCGGAGATCAGGCAGGAGCAGCGGCTCCCGGTCCCCTGGCAGCTGCTCC
CCTTCCGGATATCGCGGCACAACCTGTGGCTCAGGCTCAAGGACAGGCTC
AACCCGCTGTCGAAAAGGATGCCTTCGCCTACGATGCCGCTTGGGTAGAC
ACCAAGATGAAGAAGGCGGCTCTTAAGCTGGAGAAACTGGACTCAGACCT
CAAGAACTACAAGTCCAATTCGATCAAGGAGAGCATCCGGAGGGGCCACG
ATGACCTGGCTGACCACTACCTCAGTTGTGGCGACCTCACCAATGCCCTG
AAGTGCTATTCTCGGGCCAGAGACTACTGCACTAGTGGCAAGCATGTGGT
AAACATGTGCCTTAACGTGATCAAGGTGTCAATTTATCTCCAGAATTGGG
CCCATGTGATGAGCTACATATCCAAGGCGGAAAGCACCCCGGACTTCGCC
GAGGGCTCCAAGGAGGCTAATGCCCAGGTTCATACTCGCCTTGAATGCGC
TGCTGGTCTGGCGGAACTGCAGCAAAAGAATATAAAGTGGCCGCTAAGCA
TTTCCTCAATGCTAACTCGATCACTGCGACTTTCCCGAAATGATCTCCAC
CAGCAATGTGCCGGTCTATGGTGCTCTGCGCCTGCCCACCTTTGATCGAA
GGAGCTTAGCGTCTGTCATCGCCCTCTACATCCCTTTATTGTCTTAGACC
TGGGAGCCCCGACTCAGGGGATTTATTTTCCAGTTCTACGAAAGTAATAC
CGCCCTCCATCCGACCCTCGATAGAATGGGAACCGTGCTGTTAATGTAAC
TGGCCCAATTATACACTCT
FMO02649.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CSN1b-RA | 1802 | CG3889-RA | 137..1233 | 9..1097 | 5040 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18903626..18904691 | 1097..40 | 4615 | 97.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:39:37 has no hits.
FMO02649.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:47:14 Download gff for
FMO02649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3889-RA | 220..1331 | 1..1110 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:42 Download gff for
FMO02649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1b-RA | 133..1244 | 1..1110 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:59 Download gff for
FMO02649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1b-RA | 133..1244 | 1..1110 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:59 Download gff for
FMO02649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18903626..18904689 | 42..1097 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:42 Download gff for
FMO02649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18896726..18897789 | 42..1097 | 97 | <- | Minus |
