FMO02651.5prime Sequence
885 bp (885 high quality bases) assembled on 2008-05-23
> FMO02651.5prime
CAGTCGACATGTGGAATCAACGGAAAGTACACGCCTACCTGCTGCTCTCC
ATAGTAGCCAGCAATTGTCTGCTGATGACCTACGCATTTCCACAGCAGGA
GGTCTATCAGAGGCAGCACCAGGTGACCCAGTCACCTGTCTACCGGGATG
AGAGTGTGGCCAGAAAGTTTGCGGTGAAGCCGAATGCCTCGAAGAAGGTG
GCTCTGGACGATATCGAGGATGATTTGGAGACCAATCAGATCCAAGAGAG
TGTGGGAGGACCCGGCGGTTTCACCTGGTCTAACATGCTATCCACCGTGA
TGACCATGTTCTTCAACGGAGCCGTCAACTCACCAACCAAGTCCGATGAT
GTGGATAGTTCCATTGGCTTGGGCGGCAGTCCCTGGGCGAATGTTATCTC
CATGGGTCTTCGCATCATCAACACCTTGCTGGGCGGCGGAGCCCCTAGCG
ATGGCATCGATAAGGTCGACAACGGTGGATCTCCCATGCAGTTCATTCAG
ATCGTGATGAACCTGCTGGACGCCCTGAAGACCTCCTTCTCGCACCGCTC
CCTGACCGCCCGCTCCATGGGCAAGCGGGACTCGGTGAGCGACGCCGTCG
TCGCCGGAATCTCGCTGATGAAGGGCTACGTCCGAACCTATCGCACCTCG
GAGGACAAGTGCACGCAGCGGTACATGTGCGACGCCAATACGGAGTGCGT
CCGTGAGATCGGCGGCAGCAGCATCTTCTGCCAGCTGGGATCTTATGCCA
CCAGCTATGTCCTAGGCCGCACCAGTGGCAGCAACTTCGAGGAGCTGTAC
GACGCCGGACGTAGAGGTCGCTCCGGATTCGACTGTCGCCAGATCTATCT
GGAGTGCAACGAGGTCGCAAGCTTTTCTAGACCAT
FMO02651.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4702-RC | 1305 | CG4702-RC | 259..1124 | 1..866 | 4300 | 99.8 | Plus |
CG4702-RA | 1375 | CG4702-RA | 329..1194 | 1..866 | 4300 | 99.8 | Plus |
CG4702-RD | 1398 | CG4702-RD | 268..758 | 1..491 | 2425 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12123461..12123867 | 407..1 | 2005 | 99.5 | Minus |
3R | 32079331 | 3R | 12122171..12122424 | 742..489 | 1270 | 100 | Minus |
3R | 32079331 | 3R | 12121764..12121887 | 866..743 | 620 | 100 | Minus |
3R | 32079331 | 3R | 12123293..12123379 | 491..405 | 435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:22:26 has no hits.
FMO02651.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:47:16 Download gff for
FMO02651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4702-RA | 325..1197 | 1..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:56 Download gff for
FMO02651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4702-RA | 329..1201 | 1..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:17 Download gff for
FMO02651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4702-RA | 329..1201 | 1..874 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:17 Download gff for
FMO02651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12121757..12121887 | 743..874 | 96 | <- | Minus |
3R | 12122171..12122421 | 492..742 | 100 | <- | Minus |
3R | 12123293..12123378 | 406..491 | 100 | <- | Minus |
3R | 12123463..12123867 | 1..405 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:56 Download gff for
FMO02651.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7947479..7947609 | 743..874 | 96 | <- | Minus |
arm_3R | 7947893..7948143 | 492..742 | 100 | <- | Minus |
arm_3R | 7949015..7949100 | 406..491 | 100 | <- | Minus |
arm_3R | 7949185..7949589 | 1..405 | 99 | | Minus |