FMO02653.5prime Sequence
1205 bp (1036 high quality bases) assembled on 2008-05-23
> FMO02653.5prime
CAGTCGACATGGAATCGGAGACGAAAGCGAGCGCCGAGGAGAAGCAGCAG
GAGAACCCCTCGACAGTGCCCATGGACACGCTGGATCCGCCGCCACCGTG
TGGCAGCTCCAAGACCCTCAAACGCTGCCTCAGTGTGCCAATAATCCGGA
CTCCGCCGGCGGGCAAATCGGGAAAGACGCCGATGACCACACGCGCAGCC
GCAGCGGCTGCTCTGGCGGCCAAGGAGCACGAGCAGACGCCCAAGAAGAG
CCAACAGGTGGTGGATATCCAAATGCCGAATGCCCCATCCATCGATTGCT
TCGGCAAGAACATACACATACGATCGCAGCCCAATTCCAGGGAGGTTTCA
CCGGCTCCCGTCTTCAATATATTCACACCTCGAGCCAGAAGGTATTCGGC
CAGCTATAGTCCACTGACCACGGCAGCCAATGGAGCCACTCTCTGTCTCA
CGCCTCGAGTTTCGCAGCTGCGGCAGGAGGAATGCGCAGATCTAAACAGC
CGGGAGGTTAACCATGAGCGGGAAGTTCATCGGGAAATACAAATTTCGCA
GAGCTGGGAGGATCTCACGCTGGTGGCCGAGAACTGGTCGTGCAAATCGG
ACGAGTTCTCCAATCCCCTGCAGGTCAGCCTGCCACCCACCGGCACCACC
AGCTGCTCCAGTCCCAGTCCCACAAACAATCGCGCGGGCATGAGATTACC
ATACTCCCCGTCGCCGACGAGACGTACTTTCGCCACCAGGCGGTCGATGT
CTCCCATAGCCATGAGGCCATCCCAGCTGGGACCCGTGAAGAGAAAATTT
GAGCTGGACGATAACCCCACTCAGGGCAGCAACTGGAGCGTGTACTCACC
TCCGCCTGTGAAGAAGATATTCACGGAAAGTCGCGGCTCCTCACCGGTGT
GCCAATCGCCCTCGTCGTGTGTCCCAGTCCCGATTCCGGACCTTTGACGG
CGCCTCACGCCCAGTTGTTCATCTCGAAGCTGTGCCACAGCAATTCGGTG
AGCGAAATGGGATAAATACAATAGCAGCAGCTCGGGATGTCGTCGCTTGT
TTCCGCCTCGCCCGGAGGTGTTGCAGCGGTCCAAATCTTGGAGCAGCCAT
GTGCCTTGGTTCGCGGCATTCGAGCAGCACTCGACCAGATTCGATACGAT
CGGACGCACTCCGGGCGCGAGTCGACCCTTCTCTTAGTGTCAACCGCAAT
CGTCT
FMO02653.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:24:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4497-RB | 2741 | CG4497-RB | 250..1355 | 9..1106 | 5210 | 98.7 | Plus |
| CG4497-RA | 2566 | CG4497-RA | 75..1180 | 9..1106 | 5210 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:24:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7192492..7193363 | 880..9 | 4360 | 100 | Minus |
| 2L | 23513712 | 2L | 7191817..7192052 | 1106..879 | 660 | 93.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:24:58 has no hits.
FMO02653.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:47:20 Download gff for
FMO02653.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4497-RA | 69..1196 | 1..1121 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:31:48 Download gff for
FMO02653.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4497-RA | 70..1197 | 1..1121 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:02 Download gff for
FMO02653.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4497-RA | 70..1197 | 1..1121 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:02 Download gff for
FMO02653.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7191800..7192050 | 881..1121 | 92 | <- | Minus |
| 2L | 7192492..7193368 | 1..880 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:31:48 Download gff for
FMO02653.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7191800..7192050 | 881..1121 | 92 | <- | Minus |
| arm_2L | 7192492..7193368 | 1..880 | 99 | | Minus |
