FMO02658.5prime Sequence
1196 bp (1030 high quality bases) assembled on 2008-05-23
> FMO02658.5prime
CAGTCGACATGTGGCTGCTGTTGCCTATTCTGCTATATTCGGCGGTATTC
CTCTCGGTGCGGCACATTTACAGCCACTGGCGACGCAGGGGATTCCCCTC
GGAAAAGGCCGGCATTACGTGGAGTTTCCTGCAAAAGGCCTACAGACGGG
AGTTCCGACACGTGGAGGCCATCTGTGAGGCCTACCAGTCGGGCAAGGAT
CGGCTTCTGGGCATCTACTGCTTCTTCAGGCCTGTCCTTCTGGTGCGAAA
TGTGGAGCTAGCCCAGACGATTCTGCAGCAATCAAATGGACACTTCAGCG
AACTGAAGTGGGACTATATCTCGGGTTATCGCAGGTTCAATTTGCTGGAG
AAACTGGCGCCCATGTTTGGCACCAAACGATTGTCCGAGATGTTCGGGCA
GGTCCAGAAAGTGGGTGATCATTTAATTCACCATTTGCTGGACAGGCAAG
GCCAAGGATGTCCACAGGAAGTGGATATCCAGCAAAAACTCAGAGTTTAT
TCCGTCAACATAATTGCCAATCTGATTTACGGCTTGGACATTAATAACTT
TGAGCACGAGGATCATATCTTGACCAGCTACCTGAGCCATAGTCAGGCCT
CGATACAATCCTTCACTTTGGGTCGCCTGCCGCAGACATCTTCATATACC
TACCGCTTAAGAGATCTCATTAAACAAAGCGTTGAACTACGAGAAGATCA
TGGACTGATACGTAAAGATATTCTACAACTACTAGTCAGATTTAGAAATG
GCAACGAAGTTAGCGGCGATAAATGGCAACTAGAACCGATTAATGATGCA
GACAAACTGTTGTCCATCAAACGCTTGGCCAAAGTTGCCGAGGATCTCTT
GAAAGTATCTCTAGATGCAGTAGCTTCAACTGTAACCTTCACTCTCTTGG
AAATCCTGCAAGAACCTTTAATAGTGGAAAAACTGAGAGCGAAATAAAGA
GCTAAGCAATGAAATGTCAGCTCAATTTGAAGAGCTTATGGTCTTAGTAT
ATGGACATGTGCTTGAAGAACTTTTCGCAAATATCCACCTCTACCCATAA
TGAACGTGTTGCGCAAGGTATTCGCCTACAATCAAATTCAAATGATGAGA
AGACCTGATGGTGCCCTCACTGCTAGCCCGATAAAATCTTCATGGAAGCT
AGAAATCAGCTACTTCGCATTTCTGCAACTGTCCACACAGATGTGT
FMO02658.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp310a1-RA | 1658 | CG10391-RA | 67..1128 | 9..1060 | 5015 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18652457..18652944 | 496..9 | 2440 | 100 | Minus |
| 2L | 23513712 | 2L | 18652038..18652219 | 795..614 | 895 | 99.5 | Minus |
| 2L | 23513712 | 2L | 18651757..18651986 | 1017..795 | 820 | 96.5 | Minus |
| 2L | 23513712 | 2L | 18652281..18652397 | 613..497 | 585 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:14:04 has no hits.
FMO02658.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:47:08 Download gff for
FMO02658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10391-RA | 37..1110 | 1..1066 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:21 Download gff for
FMO02658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp310a1-RA | 63..1136 | 1..1066 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:49 Download gff for
FMO02658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp310a1-RA | 63..1136 | 1..1066 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:49 Download gff for
FMO02658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18651755..18651985 | 796..1018 | 96 | <- | Minus |
| 2L | 18652038..18652219 | 614..795 | 99 | <- | Minus |
| 2L | 18652281..18652397 | 497..613 | 100 | <- | Minus |
| 2L | 18652457..18652948 | 1..496 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:21 Download gff for
FMO02658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18651755..18651985 | 796..1018 | 96 | <- | Minus |
| arm_2L | 18652038..18652219 | 614..795 | 99 | <- | Minus |
| arm_2L | 18652281..18652397 | 497..613 | 100 | <- | Minus |
| arm_2L | 18652457..18652948 | 1..496 | 99 | | Minus |
