FMO02663.5prime Sequence
1191 bp (396 high quality bases) assembled on 2008-05-23
> FMO02663.5prime
CAATCCACATGAGCTTTATTGACCAGGAAGTCACGGAGTTCCGAGCAAAA
TGTGAGAAGCAGGGGCCGCACACGAAGATCATTATTTGCTCCCACTCGCT
GATCCGGGTTGACATATACCCGGAGCGGCCGAATCGCTCGATGACTATGT
GCCTTCGATTTCCAGAAAACTACCCGCATAGCACCCAAATTCTGGTGGAG
CTGAAGAGTCGTGTGTACTCCGAAATGCTTCTGACGGAGCTTACCCGGCT
GATCGACGACTATGCCAGGGATTTCATCGGGAAGCCACAGGCATTGCAAG
TGCTGGCCTTCGCCCAACAATATTTAACTGATAATCCGCTGTGCGTGTGC
TTGGAGGAGATCAAGCAGCTGAGAGCGGACATCAAGACTGGAGGCACAGA
GAGCCAGTTGAAGCTGAAGCAGAAGAACAAAAGCGTGGAGCTGGTCGCCA
AGGGCGGACGCTACACCTACAGAGTAATCGCTGTTGTTCCGGACAGCTAT
CCCATGCAGAGTGTGGAGCTGCGCGGTCAAGATTCCAATCTCCCAGCCGT
GCTCGTGCGTTACCTAAACGGCCAGTCAAAGGAAATAGCCCGGCAGTGCG
TGGAGCCACCGATCCGTATGAGCAAGGAGGCTCTAGCCAATTTTCGGCCT
GTTAGGAGTCTGCAACGCTCGCTGAAATTCTGCCTGGAAGCCACCCGGGA
CTTTCACACCGAGCGTTGTCCCATATGTGATAGTACCGTGCTACCCGAAT
ACCCATAGGACATAGAAACGGATGACAATGCCGACTTCTTCATCGAGCGC
GTCTACTGTGGTCATCTCTTTCACCAAGGCTGCCTTAACAAATACCTATC
GGAGCCTCCGTTTCCAAAGGGTGGCAATATGTCCCGCCGCGCGTCGCGTT
CTTCGTTCCGATGCCCAACCTATATAGGCAGGTCACAGGTATGCAGAGCA
CGATTCCAAACTCGGATGACACTGTGTGCGCATCAGCTGGCTCCGATCGT
GGGTGTCAGTGTAAGACGCTGAGGCCGCTGGACTAAACAGCCGACAAAAG
ACTGAGAGGAGGGGTCGACTTACTGCAGCATGCTTCGAGACATCGTTTGG
CTGCGGGCCAGTAAGCGTCTAATCTAACTAGCTATCATTCCAATAGGCTA
GGAACTGATTAGACATTGCGTGTATCTCACGAATAAAAAGC
FMO02663.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17260-RB | 1288 | CG17260-RB | 89..1179 | 9..1077 | 4545 | 95.7 | Plus |
| CG17260-RC | 1306 | CG17260-RC | 107..1197 | 9..1077 | 4545 | 95.7 | Plus |
| CG17260-RA | 1383 | CG17260-RA | 184..1274 | 9..1077 | 4545 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3037594..3038527 | 9..939 | 4390 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:01:01 has no hits.
FMO02663.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:26:32 Download gff for
FMO02663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17260-RA | 179..1205 | 1..1017 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:10 Download gff for
FMO02663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17260-RA | 179..1205 | 1..1017 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:48 Download gff for
FMO02663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17260-RA | 179..1205 | 1..1017 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:48 Download gff for
FMO02663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3037589..3038563 | 1..972 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:10 Download gff for
FMO02663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3037589..3038563 | 1..972 | 97 | <- | Plus |
