FMO02682.5prime Sequence
800 bp (800 high quality bases) assembled on 2008-05-23
> FMO02682.5prime
CAGTCGACATGTCGCGCCATCCGAGCGATAGAAAGGTGTACGTGGGCGAT
CTGGGCAACAATGCCCGGAAGAACGACCTGGAGTATGTATTTGGAGCGTA
CGGCAGTTTGCGCAGCGTCTGGATAGCCCGCAATCCGCCGGGCTTCGCCT
TCGTGGAGTTTGAGAGTGCCCGCGATGCGGCGGATGCGGTGCGCGGATTG
GACGGACGGACGGTTTGCGGGCGCCGAGCCCGTGTGGAATTGTCCACCGG
AAAGTATGCTAGGTCCGGCGGTGGTGGTGGCGGAGGTGGTGGAGGCGGTG
GTGGTGGAGGACTCGGAGGACGCGACCGAGGCGGCGGTGGTCGTGGGGAC
GATAAGTGCTACGAGTGCGGCGGACGGGGGCATTTCGCTCGCCACTGTCG
CGAAAGGAAGGCCAGGCAGCGACGCAGAAGCAACTCATTCAGCAGATCTC
GGAGCACATCGCGACGCAGGCGCACTCGCTCCAAGTCCGGAACTCGATCC
CGCAGTCGCTCCGCCGGCTCGGTGGGCCGTCGCTCCGGCCGCTCGAACGG
ACGGGACGAGAACGGATCGGCGTCGAGGTACAGCGACCACGAGCGCAACG
GCAGTGGAGCGGTAGATTCACCGCCGCCGCCAAAACGGCGCTATGAGGAT
GAGGACGATGACCGGGTTAGGGGATCGCCGCGGTCGCGTTCCCGATCTCG
ATCGGCGTCGCCAGCGGTGCGCCGTGGATCGCCGCCCAGGCGTCGTGGTG
ACTCGTCCGCCTCACGATCCGTTTCAAGGGACGCAAGCTTTCTAGACCAT
FMO02682.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:25:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| x16-RA | 1707 | CG10203-RA | 269..1042 | 9..782 | 3870 | 100 | Plus |
| x16-RB | 1784 | CG10203-RB | 269..1039 | 9..782 | 3815 | 99.6 | Plus |
| Rbp1-like-RC | 1456 | CG1987-RC | 298..354 | 108..164 | 180 | 87.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:25:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6919524..6919942 | 427..9 | 2095 | 100 | Minus |
| 2L | 23513712 | 2L | 6915046..6915403 | 782..425 | 1790 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:25:17 has no hits.
FMO02682.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:47:44 Download gff for
FMO02682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10203-RA | 328..1110 | 1..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:31:59 Download gff for
FMO02682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| x16-RA | 264..1046 | 1..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:10 Download gff for
FMO02682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| x16-RA | 264..1046 | 1..788 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:10 Download gff for
FMO02682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6915042..6915400 | 428..788 | 99 | <- | Minus |
| 2L | 6919524..6919947 | 1..427 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:31:59 Download gff for
FMO02682.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6915042..6915400 | 428..788 | 99 | <- | Minus |
| arm_2L | 6919524..6919947 | 1..427 | 99 | | Minus |
