FMO02683.5prime Sequence
1199 bp (1023 high quality bases) assembled on 2008-05-23
> FMO02683.5prime
CAGTCGACATGAGCTACGCCGCTGATGTGCTGAACTCGGCCCATTTGGAG
CTCCATGGTGGTGGCGACGCCGAGTTGCGTCGTCCATTCGATCCCACGGC
CCATGATTTGGATGCATCCTTCCGCCTTACACGCTTCGCAGATCTAAAGG
GGCGCGGCTGCAAAGTGCCGCAGGATGTGCTCTCCAAGCTGGTGTCCGCC
CTGCAGCAGGACTACTCTGCCCAGGACCAGGAACCGCAGTTTCTCAACGT
GGCCATTCCCCGCATCGGTATTGGCCTGGACTGCTCCGTCATTCCGCTGC
GACACGGCGGACTCTGCCTGGTGCAGACCACCGATTTCTTTTACCCCATT
GTCGATGATCCCTACATGATGGGCAAAATTGCGTGCGCCAATGTGCTCAG
CGATTTGTATGCCATGGGAGTCACAGATTGCGATAACATGCTGATGCTGT
TGGCGGTCAGTACCAAGATGACAGAGAAGGAGCGTGACGTGGTCATTCCG
CTGATAATGCGAGGCTTTAAGGACTCCGCTTTGGAGGCAGGCACCACTGT
GACTGGAGGCCAGAGCGTGGTCAATCCGTGGTGCACCATTGGTGGGGTTG
CCTCGACCATTTGCCAGCCAAATGAGTATATTGTGCCAGATAATGCCGTG
GTAGGGGATGTACTGGTGCTAACCAAGCCACTGGGCACCCAAGTGGCCGT
GAATGCCCACCAGTGGATTGACCAGCCGGAGCGCTGGAACCGCATTAAGC
TGGTGGTGTCCGAAGAAGATGTACGCAAGGCCTACCACCGGGCGATGAAC
TCTATGGCTCGCCTCAACCGCGTAGCCGCTCGCCTCATGCACAAGTACAA
TGCCCACGGAGCCACCGATATTACTGGATTCGGACTACTAGCACGCTCAA
ACCCTGGCTGCACATCAGAAAAGGATGTCTCCTTTGTTATCCACAATCTG
CCGGTGATCGCCAGATGGCTGCAGTGCCAAGCCTGCGCACTGTTCCAGCT
GCTGCAGGCACTCGCGAAACCTCGGAGGATTACTGATCTGCTGCCGCAGA
GCAGCCGCTGCTATTGCAAGGATTCAGAAGCAGAGGGCTACCAGGCCTGA
TTCTCGCCTCGTGAAAGGCATAAGACGTTGATATCGCAGTCTCGGTCATT
AGGGTCGCCAGGACCAGCCTTTCAATACACATCTTGTGGTGCGCGGGAC
FMO02683.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SelD-RA | 1521 | CG8553-RA | 131..1242 | 9..1099 | 5025 | 97.9 | Plus |
| SelD-RB | 1887 | CG8553-RB | 497..1608 | 9..1099 | 5025 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14269191..14270162 | 976..9 | 4695 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:24:02 has no hits.
FMO02683.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:47:52 Download gff for
FMO02683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8553-RA | 120..1253 | 1..1112 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:28 Download gff for
FMO02683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SelD-RB | 490..1623 | 1..1112 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:03 Download gff for
FMO02683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SelD-RB | 490..1623 | 1..1112 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:03 Download gff for
FMO02683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14269051..14270168 | 1..1099 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:28 Download gff for
FMO02683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10156556..10157673 | 1..1099 | 97 | | Minus |
