FMO02685.5prime Sequence
767 bp (767 high quality bases) assembled on 2008-05-23
> FMO02685.5prime
ATTATACGAAGTTATCAGTCGACATGACGGAACCAACGAGCAAGACACCG
GATGCGGTTCCGGAATCACCCGTATCACTGCCCATCGCCTCCCAATCCAT
GGATACGGCGACCATTGAAGATTTCGACGAGGACAAACCGGCCAAGGGAA
AGAAGAAAGCCAAGAATCCAAAGGGTCGCCACTCGGATTCCGACATCGGC
TCCGAACTGAAGAAGCTGGCCCAGCGCCGGATCAACGTAGCCGGTGCTCC
AAAAATGCCACTTAATGGCTACGTCCGCTTCATGAACGATCGACGCGAGG
AACTGCGACGGGAGCAGCCACAACGTACTGCCCTGGAGCACACAAGGATC
ATCGGCGAGGAGTGGCATCAGCTGCCCGAGGAGCGCAAGTTGCCCTACAT
CGAGGCAGCCGCCAAGGACAAGGCCATATATCAGGAGCAGTTGCAAATGT
TTCTCAAGGAACACCCCGAAATTGTGGCCAACGAGTTGGCCAAAGCCAAG
AAAGCCACAAAACTGGATGGTTCGCCCAAGGAAAAGACGCCGAAGGGTGA
ATCAGCCTTGGGCAAGGCGAAGAAGACCAAGGCAAAGCCGGTTAAGCGGC
AGAGCGAGGATCCGGATGATGTGCCTCTGGCCAAGGTGAAGCGTGCCCAG
ACACCACCGCCTCCCACACCGCCAGCGGCTCCAGTACAGCCCCCTCCCAG
CAGCGTGCCACCTGCGACACCTGCACCACGACCGCTGCAGCCCGGCGAGA
TACCCATCTACACCAAC
FMO02685.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hmg-2-RA | 1347 | CG9418-RA | 99..842 | 24..767 | 3720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21146301..21146704 | 24..427 | 2020 | 100 | Plus |
| 2R | 25286936 | 2R | 21146764..21147103 | 428..767 | 1700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:20:06 has no hits.
FMO02685.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:48:13 Download gff for
FMO02685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9418-RA | 89..837 | 16..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:24 Download gff for
FMO02685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9418-RA | 94..842 | 16..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:02 Download gff for
FMO02685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hmg-2-RA | 94..842 | 16..767 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:02 Download gff for
FMO02685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21146296..21146704 | 16..427 | 99 | -> | Plus |
| 2R | 21146764..21147103 | 428..767 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:24 Download gff for
FMO02685.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17033801..17034209 | 16..427 | 99 | -> | Plus |
| arm_2R | 17034269..17034608 | 428..767 | 100 | | Plus |
