FMO02687.5prime Sequence
1194 bp (1021 high quality bases) assembled on 2008-05-23
> FMO02687.5prime
CAGTCGACATGAGTGGCGCACAGCGGAATCAGGATCGCAAGATCGTTGTC
ATCGGAGCAGGAGCCTCGGGTGTGGCCTGTGCCACCAAACTGCTGGAATT
GGGCTTTCAGAATGTGCTCGTCGTGGAGGCGGAGGATCGTCTAGGTGGCC
GCATACACACTATACCCTTTGCGGACAACGTCATTGATCTGGGTGCCCAA
TGGTGTCATGGGGAACGGGACAACATTGTGTACGAACTGACACGGAAACA
GGATGAGGAGCTGCTGGAGTCGACGGGTCCGGTCTACGAAAACTATGAGT
GCGTCCGCTCCAACGGAGATGTGGTACCGGAAGAGGTATCTAGTCGCCTG
AAAGCCATCGTCGGGGATTCACTGGTCACCCGGCAACTGGAGCTGCGTCA
CTGCAGCGGTTCCTTGGGCAGCTATCTGACCAACAAGTTTTACGACACTC
TCCGGCGTCCGGAAAACTCCGATATAGACGCAGAGGTGGCCAGTGAGTTC
TTTGTCAACTATCAGAAATTCGAGAACTCCGTCGAGGCCTCGGATACGCT
AGAACAAGTTTCGGGACGAGGTTACCTGGACTATTGGGAGTGCGAGGGCG
ATATCCTGCTAAACTGGAAGGACAAGGGCTATGTGGAGCTTCTACGGCTT
CTCATGCGCTCCAGGGAGTTAAATGTGGAGCATGGAGTTCTGGAGCAGCG
TCTCCTGCTTGGCACTCGTGTTGTGAAGATCAACTGGAATCGGAACGACG
GACGCGTGGAACTTCAAATGAGCAATGGAGAGACCTGTATAGCTGACCAT
GTGGTGGGTCACGGTTTCATTGGGAGTTCTCAAGGATCAGCACCTTCGGC
TATTTGAGCCACAGCTTCCAGTAGAGAAACAACGTGCCATTGACGGTTTG
GCTTTGGAACGGTCAACAAAATCTTTGTGGAGTTTCCCGAGCATTTGGCC
CGAGGATTGGACGGGTTTCACCATGCTCTGGCGGGACGAGATTGGATGAC
TACGCGGCACTTCTCGAGCATGGTGGAGATGTCTTGGCTCTACAGGGTGA
GCTATCAGCGAGATCTTGGCGGCTGGATACATGGAAGCGCAGCACATGAA
ACTCCGTGATGAGGGTCAGGCTGCCTAGACTTTCGGAATCTGAGGTGAAT
TCCAGATTCGGCGTATTCCGAACCCCTGTGGCTGCTAGAATGCA
FMO02687.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7737-RB | 2416 | CG7737-RB | 257..1339 | 9..1079 | 5070 | 98.7 | Plus |
| CG7737-RA | 2317 | CG7737-RA | 158..1240 | 9..1079 | 5070 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11224587..11225646 | 9..1059 | 4790 | 98.3 | Plus |
Blast to na_te.dros performed 2014-11-28 20:15:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 2827..2868 | 366..407 | 111 | 73.8 | Plus |
FMO02687.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:48:17 Download gff for
FMO02687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7737-RA | 153..1240 | 1..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:43 Download gff for
FMO02687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7737-RA | 153..1240 | 1..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:34 Download gff for
FMO02687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7737-RA | 153..1240 | 1..1079 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:34 Download gff for
FMO02687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11224582..11225653 | 1..1065 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:43 Download gff for
FMO02687.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7112087..7113158 | 1..1065 | 98 | <- | Plus |
