FMO02688.5prime Sequence
1211 bp (1017 high quality bases) assembled on 2008-05-23
> FMO02688.5prime
CAGTCGACATGGCTACGGACACGGTGTCCAACGGCGAGAACTTCGCCCAG
CACTTGAGCAGAAACAGCGACGACGACGTGATCTGTCCCACATGCGACGT
GAAGATCAAGCGCAGTCAGGTGGCCGATCACTGCCAAGTGGAGATGGAGC
GATTGCACAATCCCATTAGCGCTGTCACTCCACCGACCCCAACTAGCGGA
GCAACCGCGTCCGAGGAATCCGGTTCGGTATCGGGGGGCAGACAACCGTG
GAGCGTGTTCCAGCGGGTGCAGCGCAATCGGCAGGCCCGTCAGCGCCAGC
GCACCAGGAAGCGTCCGGCTTCTCCTGCCCCACCAGCAACTGTAAATCCT
ACGGTAGCAGCTGCTCCTCCTCCAGCTGCAGCAACTCCGTCCGTAGCTGC
TGCCGAATCGAGCCAACCCACCTGTCCCGTGTGCAACCACAACTTTCCGC
AGTCCAACATCCAAGAGCATGTTAATCATTGCCTGCGCCAGAGCCGCCGC
AATGGTCAGGCCAATGGTGAGCGGCATTCGAGTGAGGACTCGGAGGACAG
CGAGGAATATGAAGAGTACGAGTGGGCGGGACAGAAGCGCATTCGCGTCT
CCACTCTCGTGCAAGGAGGCTATTCCGCCCTGGGCCTGGGCCAGAGAATC
AAATACAATGGCAGTCAGCAGGCGCAGGACGACGAGGACGAAGATCTCAA
CGTGGACGAGGATGACACTCACATCTATGGTCCTACGCAGTATGGCGAGG
GCGATGTGATCCCACTGGTCAACGAGGACACAGAGGGAAATGTTTCCGAG
GCGGATGTTACCAGCTACGTGCGCCGACTTATCTCCTCTAGCGATGGGCC
CAAGCCAAACCATTCCAGCGAAGCCACCGGAGCAAGAGCCTGCCAGCCAC
AAGCAACGTGGAGGCTTCACCAGCCAGCGAGGAGCCGTCTACGTCGCGGT
CCACGCGATCCACCTCCCAATAGCAGCAGATCATCGAATCGCTGAGCCAG
CTGCGGCTCTACGAAAGCAGCGCAGGCAGTACAGTGCTGATCTGCATCGA
CGACTACAGATTCCCGCATCTTCCGTGTCTTGCTGGCACGTCACTTGCAG
CCATGTTTGGTGCAAACGCTCGGGCTCAAGCTGGTCCCGCAGTGCAACGA
TACAGCTAGACTGACGATCTATCTGCAGCTTTCTAACATTCGTTTGTGCC
GCCGGCCCCGA
FMO02688.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4813-RA | 1531 | CG4813-RA | 146..1300 | 9..1148 | 5065 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22725258..22726269 | 1016..9 | 4735 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:22:39 has no hits.
FMO02688.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:48:19 Download gff for
FMO02688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4813-RA | 626..1786 | 1..1148 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:44 Download gff for
FMO02688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4813-RA | 108..1268 | 1..1148 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:50 Download gff for
FMO02688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4813-RA | 140..1300 | 1..1148 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:50 Download gff for
FMO02688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22725115..22726273 | 1..1148 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:44 Download gff for
FMO02688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18550837..18551995 | 1..1148 | 96 | | Minus |
