FMO02690.5prime Sequence
1197 bp (1011 high quality bases) assembled on 2008-05-23
> FMO02690.5prime
CAGTCGACATGTATGTGGCCAACACGACGGGCGGCCTAATGCTGCAGACC
ATGTTGTATTTGGCCAACCACACCAGTCGGGCGGCAGTCAACACCCTGGT
GGACCTACCACCAGCTCCCAAAAGTGACATCAACGAGGTAAAATGCTTCG
GAGTGTATGGCTGTTTTCCGATCAATGGACCCTGGAACACGGTGACCCGT
TCGATAAATGTGCATCCGCAGAAGCCTTCGGAGATCGAGCCCCATTTCAC
ACTGCACACGCGAAGGGCATTGGATCAGCCCAAGTATCTGGATCTCAATG
ATCCAGAAAGCGTTCAAGGCATGGGAATGAATCCCAAGGGCAAGATATTC
CTGCTTGTCCATGGATACCTGGAGTCCGGTGAAATTCCCTGGATGTGGGA
CATGGCCAAGGCGCTGCTGGCCCACGAGCCCGAGGGTCGGGCATCCGTGG
TCCTCATCGATTGGGGCGGTGGCGCTAGTCCGCCGTATGTCCAGGCGGTT
GCCAATATCCGGCTAGTGGGCGCCATCACCGCCCATGTGGTGCACATGCT
GTACGAGGAGTTGCGTCTTCCGAATCTGGACAATGTGCACATCATTGGTC
ACTCACTGGGTGCCCATCTGTCCGGCTATGCCGGCTATCACCTGCAGCAC
GACTTTGGACTGAAACCGGCCAGGATAACGGGTCTGGATCCGGCTGCTCC
TCTCTTCACGGACACCGATCCCATCGTGCGGCTGGACAAGACGGATGCCC
ACTTCGTGGACATTGTGCACACGGATGCCAATCCCCTGATGAAAGGCGGG
CTTGGCATCAATATGCGACTGGGACATGTGGACTTCTTTCCCAACGGTGG
TTTCGATAATCCCGGCTGCAACAAGAAGTTCCAGGATGTGGTCAAGAGAA
GACGCTGTTCCTCACCATGCAGGAGTTCCTCGGCTGCAATCACATTCGCA
GTCAGCAGTATTTTACGAAAGCATCGCTCGCAGTGTCCTTTCCTGGATAC
CTGTGATTCTTTCGGAGCTTTAGACACGAATGCACCAGTGCAGAGCGGCC
ACCTGCCTGCAAATGGGCTAACCAAGCAGAGATACGAACCAGTGATCTGG
CAGCTGACAAGGGCTCACAGGTCCTCACTTGACTGAATAGCAGTCTTCTG
GCCATTCCATATGGAATAGCAGTGCAGATCCCCGGAACCCCATGAAG
FMO02690.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5966-RA | 2619 | CG5966-RA | 450..1528 | 9..1070 | 4975 | 98.3 | Plus |
| CG5966-RB | 3751 | CG5966-RB | 1699..2660 | 126..1070 | 4390 | 98.1 | Plus |
| CG5966-RB | 3751 | CG5966-RB | 450..567 | 9..126 | 590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5990489..5991360 | 126..994 | 4210 | 99.7 | Plus |
| X | 23542271 | X | 5989240..5989357 | 9..126 | 590 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:43:47 has no hits.
FMO02690.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:42:59 Download gff for
FMO02690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5966-RA | 425..1475 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:50 Download gff for
FMO02690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5966-RA | 446..1496 | 1..1045 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:34 Download gff for
FMO02690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5966-RA | 446..1496 | 1..1045 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:34 Download gff for
FMO02690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5989236..5989357 | 1..126 | 96 | -> | Plus |
| X | 5990490..5991383 | 127..1014 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:50 Download gff for
FMO02690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5883269..5883390 | 1..126 | 96 | -> | Plus |
| arm_X | 5884523..5885416 | 127..1014 | 99 | == | Plus |
