FMO02691.5prime Sequence
808 bp (808 high quality bases) assembled on 2008-05-23
> FMO02691.5prime
CAGTCGACATGCGCGGAATCGAGGGCAAAGTGCTTGTTCTGGGCTCGCGA
GGTGTGGGCAAAACACGTTTGGTCATCCGCTACATAAAGAACACGCTGCA
CCGCAAGGAAAGCGAGGTACCCACGATAGCCGTGTCCTTCTTCACGTGCA
ACATCATCCTGGACGAGGTCAAAATTAAATTGCAAATCTGGGATACAGCT
GGCCAGGAGCGGTATCGGGCGGTGGCGCCCATGTACTACAGGAATGCCAA
CGCCGCCATTCTGGTGTTCGATCTAACGCAGTACAAGACATTCACGGAGA
TCAAGTCGTGGATTCAGGAGCTGCACCGCAATGTCCAGGACCCGATGATA
CTGACGCTGGTGGGTAACAAGATGGACATGCAGGCGCAGCGAGCGGTCTC
CCGGGAGGAGGCCTTCGTGTTCGCCACCTCCATTGGGGCCACCTACTTCG
AAACCTCCACCGAAACGGATCAGGGACTGGAGCAAGTGTTCATATCCACT
GCCCAGGGACTGGTTCGCCTGGCAGACGAGGGCAAGAGTCCGTCGCTGCG
CTCCTTCCAGTCGACTGATTCGCTGGCCTACACCAACACCAACACTGCCT
TCAGTCACACGGTGGCCGCCCTGGCCAGGAGCTCCGGAATGCAGCGTTCC
GTCTGCCCTACGTGGACATTGGCTTGGCGGTGGAGGGCGAGGACGTGAAG
ACCAATGGCGTGGGGCGGCTGGAAACGGCGCCGTGGAGCATCGAGCACAT
CGCCCTCGGCGAGGTGGAGAGGCCCAGCTGGTGTTGCTACGCAAGCTTTC
TAGACCAT
FMO02691.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RabX1-RA | 1648 | CG3870-RA | 340..1126 | 5..790 | 3895 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23520361..23520966 | 790..186 | 2980 | 99.8 | Minus |
| 2R | 25286936 | 2R | 23522059..23522194 | 185..50 | 680 | 100 | Minus |
| 2R | 25286936 | 2R | 23523226..23523274 | 53..5 | 230 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:40 has no hits.
FMO02691.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:43:00 Download gff for
FMO02691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3870-RA | 297..1095 | 1..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:58 Download gff for
FMO02691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RabX1-RA | 337..1135 | 1..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:10 Download gff for
FMO02691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RabX1-RA | 337..1135 | 1..802 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:10 Download gff for
FMO02691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23523228..23523277 | 1..51 | 94 | | Minus |
| 2R | 23520352..23520966 | 186..802 | 99 | <- | Minus |
| 2R | 23522059..23522192 | 52..185 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:58 Download gff for
FMO02691.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19409582..19409715 | 52..185 | 100 | <- | Minus |
| arm_2R | 19410751..19410800 | 1..51 | 94 | | Minus |
| arm_2R | 19407875..19408489 | 186..802 | 99 | <- | Minus |
