FMO02692.5prime Sequence
1206 bp (1004 high quality bases) assembled on 2008-05-23
> FMO02692.5prime
CAGTCGACATGGCACTACGCGTGGCAGGACTCTTCCTGAAGAAGGAGCTG
GTGGCTCCCGCAACACAGCAGCTGCGTCTGCTGCGTACTGGCAATACCAC
CCGCTCCCAGTTCTTGGCCAACTCCCCCAACACGGCTCTAGACAAGAGCA
TTCTGCAGAGGTACCGCAACCTGGAAACGCCGGCCAATCGAGTGCAGGCT
ACTTACTTATGGATCGACGGTACCGGCGAGAACATTCGCCTCAAGGATCG
CGTTTTGGACAAAGTACCCAGCTCCGTGGAGGACTTGCCGGATTGGCAGT
ACGACGGCAGTTCCACCTACCAGGCCCATGGCGAGAACTCGGACACCACG
CTCAAGCCACGCGCCATATATCGCGATCCCTTTAAGCCGGGAAAGAACGA
CGTAATTGTCCTGTGCGACACCTACAGCGCCGACGGCAAGCCGACGGCGT
CCAACAAGCGTGCCGCGTTCCAGGCAGCCATTGACCTAATTAGCGATCAG
GAGCCCTGGTTCGGCATTGAGCAAGAATACACTTTATTAGACGTGGACGG
ACGTCCCTTCGGCTGGCCGGAGAACGGTTTCCCAGCCCCACAAGGTCCTT
ACTACTGCGGCGTGGGAGCTGACCGTGTGTACGCTCGCGATCTTGTGGAG
GCCCACGTCGTGGCCTGCCTGTATGCTGGGATCGACTTCGCCGGCACCAA
TGCCGAGGTAATGCCCGCGCAGTGGGAGTTCCAAATTGGTCCAGCCGGGA
TTAAGGCATGTGACGATTTATGGGTGTCGCGATATATTTTGCAGCGCATA
GCTGAGGAGTATGGCGTAGTGGTCACCTTTGACCCCAAACCGATGGAGGG
TCAGTGGAACGGAGCCGGCGCGCATACCAACTTTTCCACGAAGGAGATGC
GTGCTGATGGCGGAATCCAGGGCCATCGAGGAGCTATCGAGAGCTGAGCA
AGCGCCACGAGCGCACATCAAGGCATACGACCCCAAGAAGCAAAGAACAT
GAACGGCGCTTGTGGGACGTCTTGAGACTTCTAGCATCGATAAGTTTTCT
TGGGGCGTGCCCAACCGGCCGTAAGGTGTGCGAGTGCCGCGTGGCGTTGG
CACGGCCGCAAGAAATCTGAGAACGGCGCCAAGACCACTGATTCCTCAGC
GGTGAGTCACTCGCAATGTGTGTTGCGCACGGTCGTGCTCTTCAGAGAGG
CAGGCA
FMO02692.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gs1-RD | 1699 | CG2718-RD | 187..1291 | 9..1108 | 5190 | 98.5 | Plus |
| Gs1-RB | 2176 | CG2718-RB | 187..1291 | 9..1108 | 5190 | 98.5 | Plus |
| Gs1-RC | 2396 | CG2718-RC | 407..1511 | 9..1108 | 5190 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 132483..133587 | 9..1108 | 5005 | 98.1 | Plus |
| X | 23542271 | X | 11428742..11428856 | 499..613 | 215 | 79.1 | Plus |
| X | 23542271 | X | 11428985..11429088 | 630..733 | 205 | 79.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:20:15 has no hits.
FMO02692.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:43:01 Download gff for
FMO02692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2718-RB | 204..1312 | 9..1111 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:15 Download gff for
FMO02692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gs1-RC | 407..1515 | 9..1111 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:18 Download gff for
FMO02692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gs1-RC | 407..1515 | 9..1111 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:18 Download gff for
FMO02692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 132483..133578 | 9..1099 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:15 Download gff for
FMO02692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 132483..133578 | 9..1099 | 98 | == | Plus |
