FMO02694.5prime Sequence
1199 bp (1039 high quality bases) assembled on 2008-05-23
> FMO02694.5prime
CAGTCGACATGTCGGTGGAATCCTCCAGTTCGGCGGTCCAACAGCCGCCG
TCGTCCTCGAACCTACCGCTCCTGGGCGACAACCAGGCGGTGGCCACGAC
CAGCTCCGCCTCCTCGGCCTCTTCCTCTTCCACATCGTCGTCCTCCTCGT
CGGTGGGCGGCGGCAATGTGGTGGGCGTGCCGCTGGACACGCAGGGCAGC
GGAGAACCGCCGGCCAAGAAACAGTTGTTGGACGGAGGGGGCGGTGGTGC
CACCAGCAGCAGCGGCAGCAGCTTGCTTTCCAGTGCCGCAGCCGCCTCGG
GAATGCACGAAAAGCTGGCCCACCGCATCTCCAATGCCCTGTGCTGTGCC
GTCTGCCTGGATTTGCCCAAGACGGCCATGTACCAGTGCCAGATGGGCCA
TCTGATGTGCGCCGCCTGTTTCACGCATCTGCTGGCGGATGGACGCTTGC
GCGATCAGATTGCCACGTGCCCCAATTGCCGCGTGGAAATTTCTAAGAGC
ACTGCGTCGCGCAACTTGGCCGTGGAGAAGGCCGCCTCAGAATTGCCCAG
CGAGTGTCAATTCTGCAACAAGGAGTTCCCATACAAATCTCTCGAACGCC
ATGAACAACACGAGTGCCAGGAGCGCCCGACCAAGTGCAAATACCATCGC
ATTGGCTGTCAGTGGCGGGGACCCTACCACGAGACCAACGAGCATGAGCG
CAACTGCTTGCATCCCCAGAAGTCTGGCTACGAGGTAATGGCAGCCCTGG
AGGCCCACGACGATAGGATCAAGGAGGAGAAGAAGATGTTTACACCCTGA
TTGACTTGCTTAGCTACGAGAAGATCATATTCAATGACCTCCAAATGAAA
CCCTACCGCACAGACGAGTACGTGCACAAGCTCTTTTTATGAGACGGCCC
GCTTCTCGGCCTTCAATCACAGTGGTGTGAAGGCGCGCATCAACAACAGC
CAGCGCGATCCGCATCAGTCAACGAGCGGACCATCACTATCAGCTGATCC
TCAGACAAGACAGCACGCCCATGAGCATTAATTTCTTTGGCCTGAGGGTT
CGGTTCTCGATATGAAAGTTCACGCCAGAATATCAACTGAATCACGAAGA
CAAGTACGAAAGCAGTACATGTCTGGCAATGGCATGATCGGGGTACGGAT
CAAGCAATGCAACGTATGCTGCCACAAAGGCATATACTTCTCGTCCTGT
FMO02694.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32486-RD | 2356 | CG32486-RD | 300..1509 | 8..1190 | 5030 | 95.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3070162..3070540 | 386..8 | 1895 | 100 | Minus |
| 3L | 28110227 | 3L | 3057430..3057582 | 836..685 | 715 | 99.3 | Minus |
| 3L | 28110227 | 3L | 3057029..3057271 | 1070..836 | 640 | 91.8 | Minus |
| 3L | 28110227 | 3L | 3057641..3057764 | 684..561 | 620 | 100 | Minus |
| 3L | 28110227 | 3L | 3057829..3057944 | 560..445 | 580 | 100 | Minus |
| 3L | 28110227 | 3L | 3058066..3058127 | 445..384 | 310 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:17:50 has no hits.
FMO02694.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:26:12 Download gff for
FMO02694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32486-RD | 296..1388 | 1..1086 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:41 Download gff for
FMO02694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32486-RD | 296..1388 | 1..1086 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:48 Download gff for
FMO02694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32486-RD | 296..1388 | 1..1086 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:48 Download gff for
FMO02694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3057032..3057270 | 837..1067 | 92 | <- | Minus |
| 3L | 3057430..3057582 | 685..836 | 99 | <- | Minus |
| 3L | 3057641..3057764 | 561..684 | 100 | <- | Minus |
| 3L | 3057829..3057943 | 446..560 | 100 | <- | Minus |
| 3L | 3058066..3058124 | 387..445 | 100 | <- | Minus |
| 3L | 3070162..3070544 | 1..386 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:41 Download gff for
FMO02694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3057032..3057270 | 837..1067 | 92 | <- | Minus |
| arm_3L | 3057430..3057582 | 685..836 | 99 | <- | Minus |
| arm_3L | 3057641..3057764 | 561..684 | 100 | <- | Minus |
| arm_3L | 3057829..3057943 | 446..560 | 100 | <- | Minus |
| arm_3L | 3058066..3058124 | 387..445 | 100 | <- | Minus |
| arm_3L | 3070162..3070544 | 1..386 | 98 | | Minus |
