FMO02695.5prime Sequence
1070 bp (855 high quality bases) assembled on 2008-05-23
> FMO02695.5prime
CAGTCGACATGTCAGCTCAACTGGCCAGAAACTGGCCGTACATCTGGCAA
CAGCTCAATGCTCTGCTGCACAACACCTCGCCGGTCATAACGCTCATCTG
CGTGGTGACCACGTTCGGCTACCTGCTATCCTTCTCGGAGACGGCCATCC
TGCTGCTCAGCGTCACTCCCGGTTACATCCTGCCCAATGGCAAGTTCTGG
ATATGGACCGCCTTCACGTTCTGCTTCATCGAGCTGCACTGGTGGGAGGT
GGCCGTCGACGTGGTCACCGTCGGCCTGTGCGGCAAGATGCTGGAACCGC
TCTGGGGCCAGCTGGAGATGTTCAAGTTCTTCGCGCTGAGCAACTTTGGC
GTCTCGCTGCTGACCACTGTCTACTATTTGTTCTACTACATGGTCACCAA
GAACCCGACCATTCTCTTCGAGGTGCACATTCACGGCCTGGCCGGATACG
TGGCTGGCATCTGCGTAGCCGTACGCCAGATAATGCCCGATCACCTGATC
TTCAAGACGCGCTACGGACGTCTGACCAATAGGAACGTTCCCCTCACGGT
GCTCATCATGGCCATCATACTGTGGGCCATTGGCCTGCTAGATGGCACTT
ATCCGGCTATGTTCGCCTCCGGATCGCTGGTTTCTTGGATCTATCTCCGC
TTCTATCAACACCATCCCAATGGGCGTGGCGACAGCTCGGAGAGCTTCAC
GTTCGTCAGCTTCTTCCCAAAACGTATCACAGCCGTTTATCACGTATTGG
TTAATCCCATTTACAATTGCTGTTTGCGGGCGGGCGTGGTCAAGACGCCC
ACGCCGCTGCGGACGATATCTACGGCCAGCCTGACGTCGTTTCGTTGCAA
TGCCGGAAGTGGATCGCATGAACATTGAGAGAAGCGACAAAATGCCTTAG
AGGCGCTAGTGAGCGCCTAAAAGCCACGGACTTCAGCCTGCCACGCCCAG
CTGTCTAAATCGTTCCCGCAGCAGCAGAACTGCAACATCATCATCACCAG
ATGAGCCGCACCACAGCAAAGCCTCCAAGTCACGGCACTGGGCCACAGTT
CAAGCCATGGAAGCGGGCCC
FMO02695.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:23:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9536-RB | 1888 | CG9536-RB | 230..1296 | 8..1069 | 4685 | 96.8 | Plus |
| CG9536-RA | 1944 | CG9536-RA | 230..1296 | 8..1069 | 4685 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:23:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6476221..6476746 | 533..8 | 2630 | 100 | Minus |
| 2L | 23513712 | 2L | 6475496..6475804 | 839..531 | 1450 | 99.4 | Minus |
| 2L | 23513712 | 2L | 6475156..6475271 | 1000..886 | 300 | 89.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:23:54 has no hits.
FMO02695.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:42:55 Download gff for
FMO02695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9536-RA | 221..1293 | 1..1070 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:31:07 Download gff for
FMO02695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9536-RA | 224..1296 | 1..1070 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:26 Download gff for
FMO02695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9536-RA | 224..1296 | 1..1070 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:26 Download gff for
FMO02695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6475446..6475802 | 533..886 | 97 | <- | Minus |
| 2L | 6476222..6476752 | 1..532 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:31:07 Download gff for
FMO02695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6475446..6475802 | 533..886 | 97 | <- | Minus |
| arm_2L | 6476222..6476752 | 1..532 | 99 | | Minus |
