FMO02702.5prime Sequence
1262 bp (1051 high quality bases) assembled on 2008-05-23
> FMO02702.5prime
TAAAATACGAAGTTATCAGTCGACATGGGTCCCAGCCACATTCCTCCGCT
GACCTACAAGGTCGTGGCCGAGTGCTCCGTCTCCAAAGCCCGGGCGGGAC
TGATGACCCTAAGGCACAGCGAGGTAAACACCCCGGTCTTTATGCCCGTG
GGCACTCAGGGAACCTTGAAGGGCATCGTGCCGGACCAGCTCATCGAGCT
GAACTGCCAGATTCTGCTGGGGAACACCTATCACCTGGGCCTGAGGCCCG
GAATCGAGACACTGAAGAAAGCCGGTGGTCTGCACAAGTTTATGGGCTGG
CCCAGGGCCATTCTAACAGATTCCGGTGGCTTTCAGATGGTTTCCCTGCT
GCAGCTGGCCGAGATCGATGAGCACGGTGTGAACTTCCGGTCGCCCTTTG
ACAACAGCCAGTGCATGCTGACGCCGGAGCACTCCATCGAAATCCAGAAC
GCCATTGGTGGGGATATTATGATGCAGCTGGATGATGTGGTCAAGACCAC
AACAACTGGCCCCCGGGTGGAGGAGGCCATGGAGCGGACTATTCGCTGGG
TGGATCGCTGCATAGAGGCCCATGCCCGCGACGATGACCAGTCGCTGTTC
CCCATCGTCCAGGGAGGATTGGATGTGCCGCTGCGTCAGCGTTGCGTTTC
CGCTCTCATGGAGCGCCAGGTTCGAGGCTTCGCCGTGGGCGGGCTAAGTG
GTGGCGAGAGCAAGCACGACTTCTGGCGTATGGTGGACGTGTGCACTGGC
TATCTGCCCAAGGACAAGCCGCGCTACCTGATGGGCGTGGGTTTTGCGGC
GGATCTGGTGGTCTGCGTGGCCCTGGGCATCGATATGTTCGACTGTGTCT
TCCCCACCCGGACAGCTCGATTTGGTTGCGCCCTGGTGGACAGTGGGCAG
CTGACCTGAAGCAGCCCAAGTACAAACTGGACATGGAGCCCATTGACAGA
CTGCGACTGCAGCACGTGTAGGCGTTACACACCGCTCGTACCTGCACCAC
ATCCGCCACCACGAGAGTTGTCTTCAGCTCCCTTGTTGAGCATACCCAAC
GTTGCCTAACAGCTCAGGCTGATGAGAGCATGCGGAGCCATTTCAGCGCG
ATGAGTTCCCAATTCGTCTCGGGACTTTATGGCAAAACTTCCAGCCGAAA
CTGTTCCGGCTTGGATACCAGAAGCTTTGTCTGCGTTAAACATTTCACGT
GTCTTGCTCGATACGAAGGGATTGTAGTAACCAGGAACCACGACATGACA
AGCTCGTAATGA
FMO02702.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgt-RA | 1566 | CG4947-RA | 102..1276 | 25..1193 | 5265 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1184321..1185408 | 112..1193 | 4520 | 96.6 | Plus |
| 2L | 23513712 | 2L | 1184166..1184255 | 25..114 | 450 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:16:02 has no hits.
FMO02702.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:26:36 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:54 Download gff for
FMO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tgt-RA | 99..1279 | 20..1197 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:52 Download gff for
FMO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tgt-RA | 99..1279 | 20..1197 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:52 Download gff for
FMO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1184163..1184249 | 23..108 | 97 | <- | Plus |
| 2L | 1184321..1185425 | 109..1214 | 96 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:54 Download gff for
FMO02702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1184163..1184249 | 23..108 | 97 | <- | Plus |
| arm_2L | 1184321..1185425 | 109..1214 | 96 | <- | Plus |
