FMO02711.5prime Sequence
1199 bp (1028 high quality bases) assembled on 2008-05-23
> FMO02711.5prime
AAAATACCAAGTTATCAGTCGACATGATGCAAATAATACTGCCTCTTTTT
GTGCTGACTGCCTCATGTCTTGGCAGTCCGGTGAGCCAAACCCGTCGATT
CCCCAACGACTTTCTCTGGGGCGTTGGATCATCTTCATACCAAATCGAAG
GCGGCTGGAACGCGGATGACAAGGGGGAGTCGATCTGGGACTTTCTCACC
CACACTCATCCCGAGAAAATAGTCGATCGATCCAATGGCGATGTCTCGGC
GGACAGCTATCATCAGTGGAAGCGCGATGTGCAAATGGTCAAGGAGCTGC
ACGTGGGCACCTATCGCTTCTCCCTGTCCTGGCCACGAATTATGCCCGGT
GGCTATATGAACCACGTCAGTACAGCCGGCATTAAGTACTATTCCAACCT
GATCGACGAACTGCTGCGGTACAACATCACTCCGATGGTGACGATCTATC
ACTGGGAATTGCCGCAGAAGTTGCAGGAGCTGGGTGGCTGGACCAATCCG
GAGATAATTCCGCTTTTCAAGGACTATGCTCGCCTGGTGCTGGAAATGTA
CGGAGATCGGGTGAAGATCTGGACCACCGTCAATGAGCCGTGGCATGTGT
GTGAGCACGGTTACGGAGTGGATTATATGGCACCTTCGTACAACTATCCA
GGCATTCCCGCCTACCTCTGTGGTCACAATCTGCTGAAGGCTCACGCCGA
GGTGGTGCACATGTACCGGGAGCTCTTCCAGCCGCGTCAAGGTGGACGCA
TGGGCATCACACTGGATACGTCGTGGCCAGAGCCCAGGGATCCCAACTCC
GCCGAGGATCGTGAGGCCTCCGAGCGAGCCATGCAGTTCTATGTAGGCTG
GTTCGGTCATCCCATCTTTTCCAAGCACGGTAACTATCCCAAGGTGATGA
TCGAGCGCATTCGGAACTTGAGCAAGGAGCAGGTTTCGGAGCACGATCCA
GACTGCCTGAGTTCACCACTGAAGAGATTCATCGCATACGCGCACCTCCG
ACTTCTTCGGCATCAATTCTATACCAGCACTGTCACCTCAATGGTCCAAT
AATACGGCAGTTCCAGTTCCATCTTATCCAGACTTGGACGTGTCGAAAGC
CAGAGGCGTCATTGACCGATTCGATTCGTTGGCTCAGGTCATCAGGAGTT
ACATCTGTTGAATGGAATCACGGGAGTACTAAGTGCTCCGCGATATTAT
FMO02711.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9701-RA | 2005 | CG9701-RA | 213..1309 | 22..1103 | 5040 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16737222..16737990 | 264..1029 | 3680 | 99.5 | Plus |
| 3L | 28110227 | 3L | 16734422..16734623 | 65..266 | 1010 | 100 | Plus |
| 3L | 28110227 | 3L | 16733758..16733800 | 22..64 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:14:12 has no hits.
FMO02711.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:48:31 Download gff for
FMO02711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9701-RA | 185..1247 | 22..1073 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:44 Download gff for
FMO02711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9701-RA | 213..1275 | 22..1073 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:39 Download gff for
FMO02711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9701-RA | 213..1275 | 22..1073 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:39 Download gff for
FMO02711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16733758..16733800 | 22..64 | 100 | -> | Plus |
| 3L | 16734422..16734623 | 65..266 | 100 | -> | Plus |
| 3L | 16737225..16738042 | 267..1073 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:44 Download gff for
FMO02711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16727522..16727723 | 65..266 | 100 | -> | Plus |
| arm_3L | 16726858..16726900 | 22..64 | 100 | -> | Plus |
| arm_3L | 16730325..16731142 | 267..1073 | 98 | | Plus |
