FMO02717.5prime Sequence
1226 bp (1050 high quality bases) assembled on 2008-05-23
> FMO02717.5prime
AAAAAACAAAGTTATCAGTCGACATGCAGCCGCCGGAGCTCGAGATTGGA
ATGCCGAAGAGGCATCGCGAGCATATACGCAAGAATCTGAATATACTGGT
TGAATGGACGAACTACGAGCGTCTGGCCATGGAGTGCGTGCAACAGGGCA
TCCTAACCGTTCAGATGCTAAGAAATACGCAGGATCTCAATGGCAAGCCA
TTCAACATGGACGAGAAGGATGTGCGTGTGGAGCAGCATCGTAGGCTCCT
ATTGAAGATCACCCAGCGTGGTCCCACCGCCTATAACCTGCTGATCAATG
CACTGCGCAATATCAATTGTCTGGATGCGGCCGTTCTATTGGAATCCGTC
GATGAGTCCGATTCAAGGCCACCCTTTATCTCGCTAAACGAACGGAGAAC
CAGCCGGAAGTCGGCCGATATTGTGGACACACCCTCACCCGAAGCCTCCG
AAGGACCCTGCGTTAGCAAGCTCCGGAATGAGCCGCTGGGAGCACTCACC
CCTTATGTGGGTGTCGTTGACGGTCCCGAGGTAAAAAAATCGAAAAAGAT
ACATGGTGGGGATAGTGCCATATTGGGCACATATAAGATGCAATCACGTT
TCAACCGAGGCGTTTTGCTAATGGTTAACATAATGGACTATCCGGATCAA
AACCGTCGACGGATCGGAGCCGAAAAGGACAGCAAGTCGTTGATACACTT
GTTTCAAGAACTGAATTTTACGATTTTCCCCTATGGGAACGTGAATCAGG
ATCAGTTCTTTAAACTTCTGACAATGGTGACCTCCTCGTCGTATGTGCAG
AATACCGAGTGTTTCGTAATGGTACTGATGACACACGGCAACAGTGTGGA
GGGAAAAGAGAAGGTGGAGTTTTGCGATGGATCTGTGGTCGATATGCAGA
AGATCAAGGACCATTTCCAGACGGCCAAATGTCCTTATTTGGTGAACAGC
CGAAGTGCTATGTTTCCCTTTTGCCGCGCGATGAATATGATTTGGGCCAT
CCAAAGAATCAAGCAATCTCATGGAGCCAGTGTATACGCGCAAGAGGAGA
AGTGCCTGACACCAGACGGAGGCATACCAGCCGAGCACAATGTGCAAGCT
TGCGACCCCTGTCTCTTGCTAATAGCTGCAGTTACCACTCGATTCTCGAA
CGGCACTGAATCGAGTTGCAAGTGAGTGGATCATTGCCCAGAACATTGAC
TGCTAGGTATATTCCTCAGAAAGAAA
FMO02717.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dronc-RA | 2015 | CG8091-RA | 410..1493 | 24..1095 | 5120 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9969841..9970433 | 468..1054 | 2665 | 99 | Plus |
| 3L | 28110227 | 3L | 9968888..9969334 | 24..470 | 2235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:36 has no hits.
FMO02717.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:26:37 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:18 Download gff for
FMO02717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nc-RA | 402..1507 | 13..1106 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:02 Download gff for
FMO02717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dronc-RA | 402..1507 | 13..1106 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:02 Download gff for
FMO02717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9968881..9969334 | 18..470 | 99 | -> | Plus |
| 3L | 9969844..9970462 | 471..1080 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:18 Download gff for
FMO02717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9961981..9962434 | 18..470 | 99 | -> | Plus |
| arm_3L | 9962944..9963562 | 471..1080 | 98 | -> | Plus |
