FMO02719.5prime Sequence
1215 bp (920 high quality bases) assembled on 2008-05-23
> FMO02719.5prime
CAGTCGACATGTCCTCAGACAGACGCTACTATTTCGGAGCGGATTTGGAG
GACAATGAGGGTGCCATCTGCAAGGCCAACGACAACAACAACGAACAGGA
AGCGGATAAGGACGATCCGGATGAATCGGAGTTCCTGCAGGATGTGCCCT
ACTCCTCTAGCAGCATTGACCGCAGCTCGGTGGGCTCCATTCCGTGGGCG
GACGATGCCATCAAGAAGAACCTGCTGGACTGGGAGCGGGTGGAGCGGCT
GATGAGCGGCGAGGATCCCTTGACGGAGCTTCAGGAGCCCGAGTTGCGCA
ACGAGATCGCCGACTGGCACCGAAAGTTCCCTAGCCTGCTGGGCCGCCGG
ACTCGAACGCTGCGCCACCACAGCTTCGATAGTCAGACGCGGGAGGATAT
TGACTCGATTTCAAATCTTAGTCTGAACTCCCTGGACGACGACGATGATG
ACGAGGAGGCGGAGGATGGATTTCTGACACCCAAGGCAGAAGAACCAGAA
CAGCCTCATCACCACTCCTATTTACGGCACAGCCAGAAGAAGCTGGTGGA
TCTACTGGACAGGGATCTGCGGGTTACCTCCGTTTCGGTTAGACTCCTCA
AACGACAGCGCAGCCAGCAGAACCAGGCCCAGCTGCCCATCTCAGCCACC
ACCCAATCCTCGGCACGCCTGCGCATGCCGCCCATTCTCAATGTGCTCGA
TACCAACCGGCGCTTTCGGGGATTGCTCAACAACCGCAGCTTCGTTCAGC
TCACCCAGGTGCAGCAGAAGGAGCAGCTGCAGCATCAGAACCAGGCCAAG
TCCGCCGTGTTGCCACATCAAAGTCATCGATCGTCCGTCTGACACATGCC
CATGGCCGCCAATCGCTTTTTTACCACAGAACGCGGTAGTCCTGCCCTCG
CTGATCTGGGCAGGCACAGCAGGATTGCTGGCAACACCACGCCACTTCGA
GCCTACCAACTCAGCGGCGGAGGCGGAACCAACAGCATGGCCTCAGCAAC
TGTTCCTCAACCGTCTCCACCTGCATCATTTGGGGGAACTAGCGTTTCCA
GCACCCACCATCCACAGACAGATCTATTCGGCGGGCGTCCTCCTCTCGTA
ACGGAATTTTGCGCCCAGGAGCCCTTTAATACCCTCTACAGTGCTAATTC
AAGGCCTCAGCAGCTTCGAGCATCGTTAGGGCACGCCGACCAAGGTATGG
TGGCTAGTCGTTAAA
FMO02719.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31125-RA | 1450 | CG31125-RA | 252..1402 | 9..1144 | 4760 | 95.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24653513..24654569 | 1053..9 | 4425 | 96.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:43:21 has no hits.
FMO02719.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:48:52 Download gff for
FMO02719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31125-RA | 245..1334 | 1..1077 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:54 Download gff for
FMO02719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31125-RA | 244..1333 | 1..1077 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:06 Download gff for
FMO02719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31125-RA | 244..1333 | 1..1077 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:06 Download gff for
FMO02719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24653488..24654577 | 1..1077 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:54 Download gff for
FMO02719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20479210..20480299 | 1..1077 | 96 | | Minus |
