FMO02720.5prime Sequence
1261 bp (752 high quality bases) assembled on 2008-05-23
> FMO02720.5prime
ATAATACGAAGTTATCAATCCACATGGACATAGGCACTATTGAGCTGAGC
GTGGAGGCGCTGATAGGATCCCTGCTGGCCCTCAGTATCCTCTTTGCCTT
CTGCCGCAGCCTGCTTTCCGAGGACTTTGTGAGCACCTTCAAAACACGTC
ACAGCTGGAAATCAATAAAAGTGTTGGAACAGGCCTGCTTCTGCAATGTG
TGCGAGATCCTGCTAACCCCCTCCGCAGGACTCTTTTGCGACTGCTGCGG
CCTGTGCACCCATGCCACGCCCCCTTGCCAGCGGAGGGCGGACAGGGAGT
ACCGGTGCAAGGACAAGTGGTTGCGCAACGAGTCCTCCGTGCGGCACTTG
TGGGTGCATGGCAATCTGCCTATGGGAGTGCATTGTGCCGACTGCAACGA
GGAGGTGGATCACCATGTCAGCACCGATCCAGGATTATACAGATGGCGAT
GTGCATGGTGTCAGCGGTGCTATCATAACGATTGCTACACTCGCGCTGAC
TCCATGGAAGCCTGCGACTTGGGCGAGTTCAAGGACATGATCTTCCCACC
ATACAACTTTGTGGCCGCCCGAACCAGAGACTCAATGCGGCTCCACTTGG
CCAGCATTACGCCGCCAGACATTGAGAACTGGGAGCCGCTTATTGTGATC
GCCAACACCAAGTCGGGCAGCAGTACGGGTGCCAATGTGTTGTCCCTGCT
CCGCGGTTACCTGCATCCGCTGCATGTGATGGAACTGGGCTCGAGGGGTC
CGCATGACGCCCTGCAGTGGGCCGCCAAAGCCAGTCCTCGCCCGTGTCGC
ATACTGGTGGCGGGCGGCGATGGCACCATCGGTTGGGTGCTCATACATCT
ATACGCTGAATATCAGCCCCAGCCCTCGGTGGCCATCATGCTGCTGGGCA
CCGGTACGATTTGTCGCGAGTTCTGGGCTGGGAGCAGATCCGCCCTCTGT
TCTCCGACCCGGTGAAGATACTTAGAGCATACGGCGAGCACCGTTCCGTG
AATCTCGATCTGCTTTGACCTGCAATAGATAAACTGTCACTATCGACTGC
CTATTCAAGGCATCCCACGAAGACGAATCATGGTGTACAAACTATTTCAG
GTAGTGTGGGATGCTATACTCCGTTACCACTTCCTACAAGAGCCGGAAAT
CTCGCATTCTCATCTGCTCATAATGAATTTCCAATATCCTGCTGTTATCT
TACCTTCGAAGCACAACAGCGGCTTAGACAAGCCTAACTACACTCCAGCG
TGCGTGGCGTC
FMO02720.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgkepsilon-RB | 1926 | CG8657-RB | 115..1312 | 23..1219 | 4945 | 95.3 | Plus |
| Dgkepsilon-RA | 2010 | CG8657-RA | 199..1396 | 23..1219 | 4945 | 95.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12757960..12758865 | 181..1082 | 3755 | 97.3 | Plus |
| 2R | 25286936 | 2R | 12757744..12757904 | 23..183 | 805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:40:16 has no hits.
FMO02720.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:48:53 Download gff for
FMO02720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8657-RA | 199..1297 | 23..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:07 Download gff for
FMO02720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgkepsilon-RA | 199..1297 | 23..1119 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:21 Download gff for
FMO02720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dgkepsilon-RA | 199..1297 | 23..1119 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:21 Download gff for
FMO02720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12757744..12757903 | 23..182 | 100 | -> | Plus |
| 2R | 12757962..12758859 | 183..1076 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:07 Download gff for
FMO02720.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8645249..8645408 | 23..182 | 100 | -> | Plus |
| arm_2R | 8645467..8646364 | 183..1076 | 97 | == | Plus |
