FMO02722.5prime Sequence
1216 bp (1057 high quality bases) assembled on 2008-05-23
> FMO02722.5prime
CAGTCGACATGGCTTGCTATTACCGCCAGCATGCGGACACCACGGTGACG
GTTCCAAAGTTTAGCAACGAGAGTTCCAGCGGCGGAGTGACCTACTACGA
TATCAAGGTGCGAGTGGGCAAGGTGGAATGGCTGGTGGAGCGCCGTTATC
GGGACTTTGCAAATCTTCACGAGAAGCTGGTTGGCGAGATCTCCATCAGT
AAGAAGTTGCTGCCGCCGAAGAAGCTGGTTGGAAACAAGCAGCCCTCCTT
TTTGGAGCAACGTCGTGAACAGTTGGAAATTTATCTTCAGGAGCTTCTCA
TCTACTTCCGGACAGAACTGCCGCGAGCTCTGGCCGAGTTTCTGGACTTT
AACAAGTACGACATTATTTATCTGCTACAAGATCTTGCCAAGCTGTTCAA
TGAAAGCGGTGATGCTCTGCTCAGCTCCAAGAAGGAATACAACCTTTCAG
CCCTAGAGGTCTACGCTATCAGTGAGCGGCTTAGTCTTCCCTGCCCACCG
AGCCTGGATCGCGGTGGAAAGTACGACTTCTCGCACGTGCTGGACTTTTG
CACACAACTTGTCGCTTTGGTGGTCACCCCGGTCAAGGACAATGCTAGCT
ATGCCCAGGATTACAATACGGTTGATGTGCCAATCGATCGCAGCAATATT
ATTCCGAACAGACTAAGTTTTAATCTAAATGCCTTTCGCAATCTCAAGAC
GCTCAAATTTTCGGCCTTGTCTACCGAAAACATTGTGGACATCGAACTTC
TGAAGCCGACTCTCCAGACAATCTGTGTTCATAACACAACCATACAGAAC
ATAAATCAAGTCCTGCTCTGCGACAATCTGCACAAGCACTGCGATGTGCC
AAGCCTGCTGCCAGAGACTATCCTTGCATCCCCTCCGGATCCGGTCCCTC
CACTTCTAATGGTAGTGCCTTGGTCAGTGCGGATGCGTGGCAAGAGATAA
CAGACTCGACCTGACAAGCATTTGCTACCCAAATCGATGGCAGTGTACGA
ACAGCTCCAAACTCAGACGCTAATCCTTGACAGAATCGAATACGGACCGT
CAATCTGGCGGACTTCCTCACCTCAGTGCTTTCGCTTTTGGAATCTTATG
CGAAGTGGGTTGAACTGGCATGACGAATGGACCTAGTCACTCTGAGTTAG
CTCGACATTCGACTTAGTGTCGAAATACGTACTGGTAACTGGACTCAGTT
CCATCGAGATGAGAAA
FMO02722.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11807-RC | 1993 | CG11807-RC | 217..1381 | 9..1153 | 5090 | 96.7 | Plus |
CG11807-RB | 2106 | CG11807-RB | 271..1435 | 9..1153 | 5090 | 96.7 | Plus |
CG11807-RA | 1945 | CG11807-RA | 110..1274 | 9..1153 | 5090 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15203020..15203621 | 457..1051 | 2615 | 98.3 | Plus |
2R | 25286936 | 2R | 15201892..15202129 | 223..460 | 1160 | 99.2 | Plus |
2R | 25286936 | 2R | 15201616..15201831 | 9..224 | 1080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:40:07 has no hits.
FMO02722.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:48:41 Download gff for
FMO02722.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11807-RA | 88..1142 | 1..1051 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:00 Download gff for
FMO02722.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11807-RA | 105..1159 | 1..1051 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:16 Download gff for
FMO02722.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11807-RA | 105..1159 | 1..1051 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:16 Download gff for
FMO02722.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15201611..15201831 | 1..224 | 98 | -> | Plus |
2R | 15201894..15202127 | 225..458 | 99 | -> | Plus |
2R | 15203022..15203621 | 459..1051 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:00 Download gff for
FMO02722.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11089116..11089336 | 1..224 | 98 | -> | Plus |
arm_2R | 11089399..11089632 | 225..458 | 99 | -> | Plus |
arm_2R | 11090527..11091126 | 459..1051 | 98 | == | Plus |