FMO02724.5prime Sequence
1183 bp (1016 high quality bases) assembled on 2008-05-23
> FMO02724.5prime
CAGTCGACATGAGCCACAAGGGCAGCACGCACATAGCCCACAGACGGGAT
ATCGGAGACACCACGAAAGCACATGTGCAGGATGGAGAAGTACTTAGCTC
GGAAACCAATGAACACGATGGATTTCCACAGGAAGCTTATATTAAAACCG
AGCCCTTATGCGAAGATCTGTCGGAAGTCCTGGACGAGCTGGGGGAAATA
CTGGACGAGGAGCTGGCCGATATGTTGGATATGAGGCAGAGCAACATTAT
ATATAGGGACCAGGGCGAGATTATGGATAAGGAGGAGGCCGAGGTGGATG
AGGAAGAAGCGGGCACGCCACCGGCGCCCTCCATCTCACTTACCGACGAC
GCCTCTTTATTCACCAGGAGATCAAGACCATATGCTGACGATTCTCCCCT
AAGCTTTAGTGGATCTTTATACGAGCCGGGAGGCTCAAGTGGGGAAGACC
AGAAAGAACCAGTTCGTGGCAATAATTTACATGAAATTGCCTTAGTGCGG
TTCCGAAACTGTCCAGAACAGAGCTTAAAACGCTGCAGTATCGACGCTTT
CGTCGAACGAAAGTTCCCCTCGGAGAATAAGATAAATCGAAGAAGCACCC
GCAGCACATCCAATGAAAAGAGTGCCACACAAAGACGATCGGTTAGTCGC
AGTCACATCCCAAGGTGCAGAGGCAGAAGAAGGAGCCAGTCCAGGAGCCC
AACAGAACCAAAGCAAGATCGAGTCCGCCCACCCACAAAAGGCGATCAAG
TCCATCTAGAGAACACATTAGGTCTCGGAAGCGATGCTACTCTAGGGACC
GAAGAGAGCGGCGTAGCAGACTACCATCTAGGCGCAAACTTATCTCGAGG
TCCCGGAGCCCAGATCACAGAAGTCGTTCGCGATATCGTTCTCTAGGCAA
AGGTCAAGACATGCGTCGCCCTGTGCTGGGACCGTCACAGATCCTCAGAT
CTCAAGCGTTGACGGAGGCTTGGGTCGCGATTCGCAGTACGCCGTTCTCG
TATCGGTCAAGGAGCACTCTTAGGCTTATCAAACATGGGGTAGCACATCG
CATAGAAGTAGGCTTTACGGGGGAATCGGTCCGAGGACAGTGCCGTCAGC
AGAAAACCCTTCGAAGGTTCTAGCCATCAATCGGAAATCCACGCAGGACT
CCAGACGCGCATCAAGGCGCGATCAAAGATAAA
FMO02724.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32452-RC | 2130 | CG32452-RC | 164..1280 | 8..1109 | 5040 | 97.8 | Plus |
| CG32452-RB | 1932 | CG32452-RB | 164..1280 | 8..1109 | 5040 | 97.8 | Plus |
| CG32452-RA | 2018 | CG32452-RA | 250..1366 | 8..1109 | 5040 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22717977..22719036 | 8..1057 | 4745 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:18 has no hits.
FMO02724.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:48:44 Download gff for
FMO02724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32452-RB | 147..1212 | 1..1057 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:25 Download gff for
FMO02724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32452-RA | 245..1309 | 1..1057 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:55 Download gff for
FMO02724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32452-RA | 245..1309 | 1..1057 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:55 Download gff for
FMO02724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22717972..22719036 | 1..1057 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:25 Download gff for
FMO02724.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22711072..22712136 | 1..1057 | 98 | == | Plus |
