FMO02726.5prime Sequence
1236 bp (1028 high quality bases) assembled on 2008-05-23
> FMO02726.5prime
AAAATACGAAGTTATCAGTCGACATGCAGAAGGTTGCACTGCTTCTAGTC
GCCTTCCTGGCTGCGGCCGTGGCCCACCCAAATTCGCAGGAGAAGCCCGG
ATTGCTGCGCGTACCGCTCCACAAATTTCAGTCGGCCCGCCGGCACTTTG
CGGATGTGGGCACGGAGCTGCAGCAATTGCGCATTAGGTACGGCGGAGGT
GATGTGCCGGAACCGCTGTCCAACTATATGGACGCGCAGTACTATGGGCC
CATTGCCATTGGCTCGCCACCGCAGAACTTCCGTGTGGTTTTCGACACCG
GCTCCTCGAACTTGTGGGTGCCGTCCAAGAAGTGCCACCTGACCAACATC
GCCTGTTTGATGCACAACAAGTACGATGCCTCCAAGTCGAAGACCTACAC
CAAGAACGGCACTGAGTTCGCCATCCAGTATGGCTCGGGCAGCTTGTCCG
GATACCTGTCCACGGATACGGTGTCCATTGCCGGCCTGGACATCAAGGAT
CAGACATTCGCTGAGGCGCTCAGTGAGCCGGGCCTGGTCTTCGTAGCTGC
CAAGTTCGACGGCATCCTAGGCCTGGGCTACAACTCCATCTCGGTGGACA
AGGTGAAGCCGCCATTTTACGCCATGTACGAACAGGGTTTGATCTCCGCT
CCGGTGTTCTCATTCTACCTGAATCGCGATCCCGCCTCGCCCGAGGGCGG
TGAGATCATCTTTGGCGGCTCCGATCCCAACCACTACACTGGTGAATTCA
CCTACTTGCCCGTTACCCGCAAGGCCTACTGGCAAATCAAGATGGATGCC
GCCTCCATTGGCGATTTGCAGCTGTGCAAGGGCGGTTGCCAGGTGATCGC
TGACACCGGTACCTCACTAATTGCTGCGCCCTTGGAAGAGGCCACCTCTA
TTAACCAGAGATTGGTGGAACTCCCATCATCGGTGGTCAGTATGTGGTTT
CTTGCGATCTCATTCCCCATTGCCGGTAATCAAGTTTGTGCTGGGCGGAA
AGACCTTCGAGCTCGAGGGCAGATTTTATTCTCCGTGTTGGCCAGAATGG
GTAAGACCATCTGTCTGTCGGCTTTATGGCTGGAACATCCCCCCTCCAAC
GACCCTTGTGGATCCTCGGTGACGTTCATTGGCATACCACACCGAGTTGA
ATTGGCCAGGATCGTGGCCTCGCGGATGCCAAGCAGCTTCTGAACATGCG
TTTGACGCCGCGCCCAGGGTTAAGTGGTCTCATATC
FMO02726.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cathD-RA | 1396 | CG1548-RA | 104..1278 | 24..1182 | 5300 | 97.4 | Plus |
| CG6508-RA | 1379 | CG6508-RA | 418..513 | 422..517 | 195 | 80.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7822549..7823466 | 940..24 | 4540 | 99.9 | Minus |
| 2R | 25286936 | 2R | 7822294..7822487 | 1126..939 | 540 | 92.3 | Minus |
| 2L | 23513712 | 2L | 10819524..10819619 | 422..517 | 195 | 80.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:20:13 has no hits.
FMO02726.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:26:38 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:26 Download gff for
FMO02726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cathD-RA | 93..1239 | 13..1148 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:07 Download gff for
FMO02726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cathD-RA | 93..1239 | 13..1148 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:07 Download gff for
FMO02726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7822549..7823477 | 13..940 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:26 Download gff for
FMO02726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3710054..3710982 | 13..940 | 99 | | Minus |
