FMO02728.5prime Sequence
852 bp (852 high quality bases) assembled on 2008-05-23
> FMO02728.5prime
CAGTCGACATGTCGGAAATGCAGATGGACTGTGCTTTGGATCTGATGCGG
AGGCTGCCGCCCCAGCAGATCGAGAAGAACCTTATTGATCTGATAGACTT
GGCACCGGATCTCTGCGAGGACTTGCTCTCCTCCGTGGACCAGCCGCTGA
AGATCGCCAAGGACAAGGAGCACGGCAAGGACTATCTGCTGTGCGACTAT
AACCGGGATGGGGACTCCTACAGATCGCCCTGGTCGAACTCCTACTATCC
GCCGCTGGAGGATGGCCAAATGCCCTCGGAACGACTGCGCAAACTGGAAA
TCGAGGCGAACTATGCCTTCGATCAGTACAGGGAGATGTACTACGAGGGA
GGCGTCTCCTCCGTCTACCTATGGGATCTGGATCACGGGTTTGCCGCCGT
TATACTGATCAAAAAGGCGGGAGATGGCAGCAAGATGATCCGCGGCTGCT
GGGACTCCATCCATGTGGTCGAGGTACAGGAGAAGACCACCGGCAGGACG
GCCCACTACAAGCTCACCTCCACGGCAATGCTCTGGCTGCAGACCAACAA
ACAGGGTTCGGGAACCATGAATCTGGGCGGATCCCTCACCCGGCAGCAGG
AGCAGGACGCCAACGTCAGCGAGTCGTCGCCGCACATCGCCAACATTGGC
AAGATGGTCGAGGAGATGGAGAACAAGATCAGGAACACCCTGAACGAGAT
CTACTTTGGCAAGACCAAAGACATCGTGAACGGACTAAGGAGCACACAAT
CACTGGCCGATCAGCGCCAGCAGCGGCCATGAAGCAGACCTCGCAGCGGC
CATCCTGCGACGCAATGTCAAGCCCGAATCGAACGCAAGCTTTCTAGACC
AT
FMO02728.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cpb-RB | 1713 | CG17158-RB | 148..975 | 9..834 | 4060 | 99.5 | Plus |
| cpb-RA | 1591 | CG17158-RA | 211..1038 | 9..834 | 4060 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1705399..1706224 | 11..834 | 4000 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:23:25 has no hits.
FMO02728.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:04 Download gff for
FMO02728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17158-RA | 209..1036 | 9..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:29 Download gff for
FMO02728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cpb-RA | 211..1038 | 9..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:45 Download gff for
FMO02728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cpb-RA | 211..1038 | 9..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:45 Download gff for
FMO02728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1705392..1706224 | 1..834 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:29 Download gff for
FMO02728.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1705392..1706224 | 1..834 | 98 | | Plus |
