FMO02732.5prime Sequence
755 bp (755 high quality bases) assembled on 2008-05-23
> FMO02732.5prime
CAGTCGACATGTCCAACTCCCACTACCACAACTACCAGCAGCAGCAGCCG
CACTCCAGCAACGGAGATCCGGAATACCAGCACCAGCAGATGGTGCACCA
GCCGCAACGGTTCTCCAACGGCCATGGCATGAAGACCGTCGCTGTGCCAG
ACATGTGCCTGTTCTGCTTCGAGGTGCTTGACTGTGAGCTGAACAACGTC
GATGGTCCATCGGTGCCGGTGTTTAGCAACGACGCCTACCCACTCTTTGT
CACCTGGAAGATTGGGCGTGACAAGAGGCTGCGTGGCTGCATTGGTACTT
TTAGTGCAATGGAACTGCACCATGGTCTTCGGGAGTACGCCTTGACCAGC
GCCTTTAAGGACTCTAGATTTGCACCTATCTCTAGAGATGAGTTGCCACG
GCTAACTGTCTCGGTCTCGATCCTGCAGAACTTCGAGGAGGCTCAGGGCC
ACCTGGACTGGCAACTGGGCGTCCATGGCATCCGCATCGAGTTCCTCACA
GAACGCGGCTGCAAGCGCACAGCCACCTATTTGCCGCAGGTGGCCACCGA
ACAGGGCTGGGACCAGCTGCAGACCATTGACTCACTCCTACGGAAGGGCG
GCTATCGGGCTGCCATAACTCCGGAGACGAGGAAGTCCATAAAGCTAACG
CGCTACCGTTCGCAGGAGATCCAGATGCACTACAAGGAGTACCGCGAGTA
CCAGGAGCGTCGCGCCCAGTTCGGCAAGGTGCAGTGCGCAAGCTTTCTAG
ACCAT
FMO02732.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5902-RC | 1953 | CG5902-RC | 642..1371 | 8..737 | 3620 | 99.7 | Plus |
| CG5902-RA | 1956 | CG5902-RA | 645..1374 | 8..737 | 3620 | 99.7 | Plus |
| CG5902-RB | 1725 | CG5902-RB | 414..1143 | 8..737 | 3620 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23987427..23988156 | 8..737 | 3620 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-28 19:40:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6839..6925 | 29..113 | 149 | 69.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6743..6827 | 23..108 | 147 | 67.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6833 | 22..137 | 142 | 61.5 | Plus |
FMO02732.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:08 Download gff for
FMO02732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5902-RA | 606..1346 | 1..741 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:16 Download gff for
FMO02732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5902-RB | 406..1146 | 1..741 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:30 Download gff for
FMO02732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5902-RB | 406..1146 | 1..741 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:30 Download gff for
FMO02732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23987419..23988159 | 1..741 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:16 Download gff for
FMO02732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19813141..19813881 | 1..741 | 98 | | Plus |
