FMO02735.5prime Sequence
1268 bp (935 high quality bases) assembled on 2008-05-23
> FMO02735.5prime
CAGTCGACATGACAGAAGGACATGAAAGCGACTTCTTAGTAACAGTACGC
GCACAGGTAATGACCAGAGACGAGAGCACCGAGGGCTGGCTTCCGCTGGC
CGGGGGTGGCCTGGCCAATGTTTCGATCCGGAAGCGGGCTAGGCTATCCC
CATTGGCATCGGGTCATGACTACATCATCTACGGGCAGAGGATATCCGAT
CAGAGCGTCATCTTGAGCTGTGTGATCAATCGTGATCTGAAGTATTACAA
AGTAATGCCCACATTTCATCATTGGCGCGCAGGGAAGCAGCGGAATGGAC
TCACATTTCAAACGGCCGCCGATGCGCGAGCCTTTGACAAGGGCGTCCTG
CGCGCCTACAACGAGCTGATCGATGGACTGGCCAAATCGAATCCAACGAT
AATATGCCCACCGCTAACCAAATATGATTCGGTTGGCGAAGATGATGTAT
TCATGACCCTGGACTTACCTGTGGAGAGCGAGAGTTTACAAAAGATCCAT
TCAAGCCCCGAGGGCAGCGAGAAAAGTCACAAGAGCGTCAGCAACAACTC
CGACTCGGAGAAGCTGCCTCCGCCGCCCATTCACTACATATCCACGGACA
AAAACATCGGCCACCACGTCGCCGCCAGACGCACCGCCCGCTTCTGCTGC
TCCATCGCCGGCGACGGCCGGCCAGATAGCGGCCAGTGAGAACTACTCGT
ACGTGACGCTGACGGCGGTGCACCACGACTACAACTATCCGGGTGGTGGA
CCAGCCCGGTGGGGGCGCAGTGCTCAATGCTCGCAGGGAGTCGATCAGTG
CACTAAAGAAGCGCAACGCTCTGGAGGCGGCGCAAGCGATGGCGGCGGCT
CAAACGGCGGCGGGTGGTGGACTGCCTGTCGCGACGGCGGATCGGGAAAG
CCACTGCACAAGCCGAAACGTATTCGACATACTGAAGAAGGAGACGCCGC
CTGCGATGCCGCTACTGCCACGAGCTGTACAGCGGAGGACCTTCATATCG
GCGGGGCGCCTGCTAATTATGCCCCCGGAATGCGTTTTCGCACGGGCTAC
CGAGTGCATCTTTTGGGAATGGGCCTTTGTGCCCGTTTCATGAATCTTAC
CACTGCATGAGCGACGCCAGAGGGGCGAAGATCGGCCAAACATCCGTGCC
AATGTCAACGCCCCCAGCAAGTCAGTTGCAACAATCGCGCAGCGCGTGAG
ATGCCTGTGACTGTATCAAATCCCTCCTCGATGTTTGCGTGCTCCCTCTG
ACGGTTATTGGATACATA
FMO02735.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spred-RC | 4167 | CG10155-RC | 493..1612 | 8..1149 | 4895 | 96.6 | Plus |
| Spred-RA | 2657 | CG10155-RA | 493..1612 | 8..1149 | 4895 | 96.6 | Plus |
| Spred-RB | 2525 | CG10155-RB | 790..1480 | 437..1149 | 2765 | 94.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14762347..14762796 | 984..532 | 1865 | 97.6 | Minus |
| 2R | 25286936 | 2R | 14764058..14764239 | 208..27 | 895 | 99.5 | Minus |
| 2R | 25286936 | 2R | 14763830..14763999 | 376..207 | 835 | 99.4 | Minus |
| 2R | 25286936 | 2R | 14762919..14763075 | 531..375 | 785 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:23:14 has no hits.
FMO02735.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:48:57 Download gff for
FMO02735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10155-RA | 492..1599 | 8..1137 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:57 Download gff for
FMO02735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spred-RA | 493..1600 | 8..1137 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:13 Download gff for
FMO02735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spred-RA | 493..1600 | 8..1137 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:13 Download gff for
FMO02735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14762213..14762796 | 532..1137 | 94 | <- | Minus |
| 2R | 14762919..14763074 | 376..531 | 100 | <- | Minus |
| 2R | 14763831..14763999 | 207..375 | 99 | <- | Minus |
| 2R | 14764060..14764237 | 29..206 | 99 | <- | Minus |
| 2R | 14768004..14768024 | 8..28 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:57 Download gff for
FMO02735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10649718..10650301 | 532..1137 | 94 | <- | Minus |
| arm_2R | 10650424..10650579 | 376..531 | 100 | <- | Minus |
| arm_2R | 10651336..10651504 | 207..375 | 99 | <- | Minus |
| arm_2R | 10651565..10651742 | 29..206 | 99 | <- | Minus |
| arm_2R | 10655509..10655529 | 8..28 | 100 | | Minus |
