FMO02737.5prime Sequence
785 bp (785 high quality bases) assembled on 2008-05-23
> FMO02737.5prime
ATAATACGAAGTTATCAGTCGACATGGCATCCGTGCGAGGCAACTCCGTG
TACCAGGGCGTCTACGGGGCTCTGAGGACCCTGCTCCACCTGACGGCAGT
CGTGCAATTTGGCTACGGCATCTATTACGACTACAACTACGTGCAGTTCC
CCACCAGCGAGCCAGAGATGAGGATCCATCATCCCTGGGGGGGCAAATTC
AAATACCTAACGTTCCTGGATGCGATAATTCAGGCACTGTACTATATTGT
ATCGCTGGTCAACGATTTCGTGGGCACTAATGAGCTGACACCCAAGAAAC
CTCCGGCGGTTCGCAGGTTCAAGGACTGGCTGATGGCTACATTGGCCTTT
CCAGTGGCTATCAATGTGGGCGTGACCTTCTGGACACTGTACGCTATCGA
CAGGGAGCTAGTCTTCCCCAAGGTTCTGGACCCCGTGTTCCCCAGCTGGC
TCAACCACGTCCTGCACACCAACATAGTGGTTTTCATCATCCTGGAGCTG
TTCATCTCGTACAGGTCGTACCCAAAACGAAGCCAAGGACTCGCAGGACT
GGCCATTTTCATGGGCGCCTACCTGGTTTGGATTCACGTGGTGAAGCACT
ACTCGGGTGTGTGGGTGTATCCAGTGCTCGAGGTTCTCCAGCTTCCGCAA
CGCATCCTGTTTTTTGCGGCCGTCGTTGGATTCACGCTGTCACTTTACCT
GCTGGGCGAGTTCCTCAACAATACCGTCTGGGCCAAGGAAGTGAAGTTGG
CCAAGCGCAAATCCAACGCAAGCTTTCTAGACCAT
FMO02737.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3625-RB | 1341 | CG3625-RB | 94..837 | 24..767 | 3720 | 100 | Plus |
| CG3625-RA | 995 | CG3625-RA | 222..768 | 221..767 | 2735 | 100 | Plus |
| CG3625-RE | 1401 | CG3625-RE | 354..897 | 224..767 | 2720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 283889..284213 | 767..443 | 1625 | 100 | Minus |
| 2L | 23513712 | 2L | 284748..284969 | 445..224 | 1110 | 100 | Minus |
| 2L | 23513712 | 2L | 285428..285633 | 229..24 | 1015 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:00:19 has no hits.
FMO02737.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:14 Download gff for
FMO02737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-RB | 137..887 | 16..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:06 Download gff for
FMO02737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-RB | 87..837 | 16..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:25 Download gff for
FMO02737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-RB | 87..837 | 16..767 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:25 Download gff for
FMO02737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 283889..284210 | 446..767 | 100 | <- | Minus |
| 2L | 284748..284968 | 225..445 | 100 | <- | Minus |
| 2L | 285433..285640 | 16..224 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:06 Download gff for
FMO02737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 283889..284210 | 446..767 | 100 | <- | Minus |
| arm_2L | 284748..284968 | 225..445 | 100 | <- | Minus |
| arm_2L | 285433..285640 | 16..224 | 98 | | Minus |
