FMO02739.5prime Sequence
1200 bp (887 high quality bases) assembled on 2008-05-23
> FMO02739.5prime
CAATCGACATGTGGTGGCTACTTCTTTTGCTGTCCCTAATTGCGCCGTCG
TGGCAGGAGAATGCCACAGTGATCAATCCAAGTTATGTGACCAAAGCTGG
TTGTGAGGCATTGGTCAAGGAACCAAATCTCTGCGAGTGCCAGGAGCAGG
AGATCAAGTGCGAGAACCTTCAATTGCACAGTGATAATTTGCAGTTATAC
GGCATTAGCTGTAGTATATTCGATGCCAGGGGATTCGGCTATATACCACC
GCTTAAGGTGGGCAATATCGGTTCCCTGATCGTTCAAAACTGTGCCATAC
CAAATGCAGAAAGCATCAAATACTTGCTCAGTAAGCTGGGTGTTAGCAAC
TACACCGAACTGGAGATCTTCAACTATTTCGATCCCAAGAAAACGGATCG
AGGCGAGGTCCTGCAGCAACACTACACGGATCACGAGAGTCTGAAGAAAG
TATCCATCATTGGATTCAAGTCAACACTGCCTGAAAATTTTCTTGAAAAC
CTGCCGGCACTACAACAACTCTCCTTAAAGGGAAGCAGTGATTTGCCCGG
TAACATTTTGCATCCTTTGAAAAATCTAACCCATTTGGAAATTGTGGTCA
AGAATTTGGGCAAGGTGTCGGGTGCAATATTTGCAAAGCAATCGAAGCTA
AAACATCTGATGATCGACTGCGATGCCAAGAACAGTAGTGTCGAAATGTC
CGCTTTTGGACCCCAAGAACTCTGGCACATGACCGAACTTCAGTCGATCG
AGCTCTTCAATTGCGGTGATAATGTGCCAACCGAGTTGTTCTGGATGTCG
GAGCAATTGGCATACATTGGAATAATGAGCACATCAGCTATTTGAGCAAG
GACTTCCTTAACGTGCAAAAGAACTGCTCACCTTAAGATTGTAAGAAACA
TATTGCCAGGCTGCCCGATCAGCTTTCAGAACACTCCCTTGATTTAGAGA
TTCACTTGCGTCATATTTGGATCGCATTCAGAGCGGCCTTTTGACAGTTA
AAGACCTACAGTGCTGACTTGAGCACATTCGATACACCCATGCCTGATGC
CTTATCCAATCCCAACTGCATATCTACTGGCCACTCTTTAGCGGCAATGC
GACTGGCTCGATCCCAATGCCAATCGGAGAGAATAATCTCGGGGTGCACT
ACTGAAGCGCGAAATGACAATTACTCTGAGAGCACCACCGTTTGGGCTAC
FMO02739.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5888-RB | 1727 | CG5888-RB | 34..1128 | 9..1077 | 4740 | 97 | Plus |
| CG5888-RA | 1881 | CG5888-RA | 188..1282 | 9..1077 | 4740 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16404968..16405924 | 958..9 | 4395 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:23:32 has no hits.
FMO02739.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:17 Download gff for
FMO02739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5888-RA | 184..1227 | 9..1034 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:32 Download gff for
FMO02739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5888-RA | 188..1231 | 9..1034 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:49 Download gff for
FMO02739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5888-RA | 188..1231 | 9..1034 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:49 Download gff for
FMO02739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16404939..16405924 | 9..983 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:32 Download gff for
FMO02739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16404939..16405924 | 9..983 | 98 | | Minus |
