FMO02743.5prime Sequence
1219 bp (1035 high quality bases) assembled on 2008-05-23
> FMO02743.5prime
CAGTCGACATGGATTTCGTTCAAGTGTCGGAGGAGGAGGGCGACGAGCCC
ATCGAGCTGCCGGCTGAGGAGGATGGCACTCTGCTTCTGTCCACACTGCA
AGCTCAGTTCCCTGGATCCTGCGGTCTGAAGTACCGCAACCTGGACACGA
AGGCTGTGCGCGGAGTTCGCTCCAACGAGGGCAGACTGTTTCCGCCCAGC
GTGGAGTCCGGCTGGGGCGAGTACGCTTACTTTTGCGTCTTTCCCAAGGA
GAACAAGCGCAAGAGCGACGATAACTTGGAGAACTCAACTGCCAAGACCA
AACGCATCGAGACCCGTCTGCGCTGCACTGATCTCATCGTGCTCGGCTTG
CCGTGGAAGACCACAGAGGAGAGCTTGCGTGAGTACTTCGAGACCTACGG
CGAGGTGCTGATGGCCCAGATCAAGAAGGACACCAAGTCGGGCCAGTCCA
AGGGCTTCGGTTTCGTGCGCTTCGGCTCTTACGATGCCCAGATGCGCGTG
CTCACCAATCGCCATCTGATCGACGGTCGCTGGTGCGAGGTTAAGGTGCC
CAACTCGAAGGGCATGGGCCACCAGGTGCCTTGCAAGGTGTTCGTGGGCC
GCTGCACCGAGGACATTAACTCGGACGACTTGCGCGAGTATTTCTCCAAG
TTTGGCGAAGTCACTGATGTGTTCATTCCCCGGCCCTTCAGGGCCTTTAG
CTTTGTAACCTTCCTTGATCCCGACGTGGCACAGTCCCTGTGCGGAGAGG
ATCACATTATCAAGGGCGTTTCGGTCCATGTGTCGAATGCTGCTCCAAAG
GCCGAGCAGAACAGAAACCAACAGTCCAGAGCTACAACTACAACTCTGCC
AACAGCTTTGGCATGCACTCATACCACCCACAGGGTAACCACATGAATCC
GGGCCGCAACGGACACCACCGAAGTAATACCAACACAATGCTCACGGCGG
TGAGAACGCATTGTGCCCAATAATCACACATTGGCACCGCCGCTACGGCA
TGGGTGGCAACATTACGGCGCAACTCGGGCGGGGGCTACCACAACAATGG
CCGCAATCCCTCAGTGGCGGGAACCCGACCGCCAGGACGGCGGCAGCCAG
AACAACAGTCGCAGTTCGAATTCACGGAATGTAACCACCGATACGCAACG
TGGGCGGGCACACGCGTGGATGTAAACTGGTCACACGTGGACATGGTTCC
CAACATGTGCAGTGCCTCG
FMO02743.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TBPH-RF | 1930 | CG10327-RF | 119..1281 | 9..1157 | 5310 | 98 | Plus |
| TBPH-RE | 2159 | CG10327-RE | 348..1510 | 9..1157 | 5310 | 98 | Plus |
| TBPH-RD | 2156 | CG10327-RD | 345..1507 | 9..1157 | 5310 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15472742..15473578 | 844..9 | 2350 | 85.7 | Minus |
| 2R | 25286936 | 2R | 23860832..23861144 | 561..249 | 1565 | 100 | Minus |
| 2R | 25286936 | 2R | 23860150..23860516 | 1122..765 | 1265 | 95.4 | Minus |
| 2R | 25286936 | 2R | 23861206..23861446 | 249..9 | 1205 | 100 | Minus |
| 2R | 25286936 | 2R | 23860570..23860777 | 766..559 | 1040 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:16:43 has no hits.
FMO02743.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:20 Download gff for
FMO02743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10327-RD | 326..1511 | 1..1172 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:11 Download gff for
FMO02743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TBPH-RD | 338..1523 | 1..1172 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:24 Download gff for
FMO02743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TBPH-RD | 338..1523 | 1..1172 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:00:24 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:46:11 has no hits.
