FMO02747.5prime Sequence
1217 bp (1022 high quality bases) assembled on 2008-05-23
> FMO02747.5prime
CAGTCGACATGAGCCTTCAAAATGTCTGCCGCAAGGGTAACGCCTTCAAC
CTGTTGAATGTCGCCAGGAAAGTTCAATGCCGCGCTCTATCGGCCGCTGT
GGCGAATCCACAACCGAAGCAGAAGAACAGCCAGAATATCGTGCTCGTGG
ATGGAGTCCGCACACCCTTTCTGACCTCCGGAACCACCTACTCCAAGCTG
ATGCCCCATGAACTGGCCAGGCACTCGCTTTTGTCATTGCTGCAAAAGAA
CCGCCTGGACAAGGAGCTCATCGACTACATCGTGTACGGCAGCGTCATCC
AGGAGGTGAAGACCTCCAACATTGCCAGGGAGGCAGCCTTGGCAGCTGGA
TTCAGCAACAAGACACCTGCCCACACCGTCACCATGGCCTGCATCAGTTC
CAATGCGGCCATCACCACGGGCATGGGTCTGATAGCCACCAACACCTACG
ATGTCATCGTTGCCGGCGGCGTGGAGTTCATGTCCGATGTGCCCATTCGC
CACTCCCGCAAGATGCGCTCCCTGCTCCTGAAAGCCAACAAGGCAAAGAC
CCTGGGCCAGCGGCTGGCCCTGCTGTCCACCTTCAGGCCAGACTTCCTGG
CCCCCGAGCTGCCCGCCGTTGCGGAGTTCTCCTCCGGCGAGACCATGGGA
CACTCGGCCGATCGCTTGGCATCCGCCTTCAACGTATCCCGGAGCGAGCA
GGACGAGTACGCCCTGCGATCCCACACACTGGCCAAGGAGGCCCAGGAGA
AGGGCTACTTCACCGATCTGGTTCCCTTCAAGGTGTCCGGCGTGAACAGA
TCGTGGACAAGGACAACGGCATCCGCGTGTCTAGTCCCGAGAGCCTGGCA
AAGCTGAGGCCCGCCTTTGTGAAGCCCTACGGCACTGTGACAGCAGCCAA
CGCCTCCTTCCTCACGGACGGAGCTTCTGCTTGCATTATCATGACCGAGA
GAAGGCCAAGCAGCTGGGCTTCAGCCCAAGCTATCTGCGCGACTTCCTGT
TCGGTGTCGCAGATCCCGTCAACAGCTGCTGCTGGAACCGGCTACGGAAT
TCCCAAGCCTGCTCAGAAGGCTGGACTCACGCTGAGGACACTTGATTCTG
GGAAATTCCAAAGGCTTCGCCGGACAGAATCTGGCAATCTGAGCTTGGAA
TCGAATGGTTGCGCAGAAACTAATTGGGCCGAAAACGAAAGAAGGTGGAC
ATCTTCTCAAACCTGGT
FMO02747.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Thiolase-RA | 1593 | CG4581-RA | 79..1222 | 9..1142 | 5150 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23867079..23867764 | 1085..407 | 2870 | 97.2 | Minus |
| 2R | 25286936 | 2R | 23867819..23867994 | 408..233 | 880 | 100 | Minus |
| 2R | 25286936 | 2R | 23868051..23868214 | 234..71 | 820 | 100 | Minus |
| 2R | 25286936 | 2R | 23868462..23868525 | 72..9 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:24:08 has no hits.
FMO02747.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:12 Download gff for
FMO02747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4581-RA | 86..1235 | 1..1142 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:30 Download gff for
FMO02747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Thiolase-RA | 73..1222 | 1..1142 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:05 Download gff for
FMO02747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Thiolase-RA | 73..1222 | 1..1142 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:05 Download gff for
FMO02747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23867019..23867763 | 408..1142 | 96 | <- | Minus |
| 2R | 23867820..23867994 | 233..407 | 100 | <- | Minus |
| 2R | 23868053..23868212 | 73..232 | 100 | <- | Minus |
| 2R | 23868462..23868531 | 1..72 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:30 Download gff for
FMO02747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19754542..19755286 | 408..1142 | 96 | <- | Minus |
| arm_2R | 19755343..19755517 | 233..407 | 100 | <- | Minus |
| arm_2R | 19755576..19755735 | 73..232 | 100 | <- | Minus |
| arm_2R | 19755985..19756054 | 1..72 | 94 | | Minus |
