FMO02751.5prime Sequence
1211 bp (1007 high quality bases) assembled on 2008-05-23
> FMO02751.5prime
ATAATACGAAGTTATCAGTCGACATGACGAGCACGCTACAACAAGGAATC
CTGGTCGGATGCGGCAACCCGCTGCTGGACATCTCCGCCGTTGTTCCACT
GAACTTCCTGCAGAAGTACTCTATGAACGAGGATGATGCGATCCTTGCCG
AGGACCGACACATGCCCATCTACGGGGAGCTGGTCGAAGGCTACCAGGCT
GAGTTTCTGGCTGGCGGATCCGTGCAAAATTCTCTGAGAATTGCCCAATG
GATTCTTCGACAGCCCAGGGTGGCTGTGTTCTTCGGCTGCGTCGGCGAGG
ATCGGTACGCCAATATCTTGAAGGAAAAGGCGCAAGCCGCCGGACTGGAT
GTTCACTACCAGGTGAAGAAGGACGTGCCCACGGGAACCTGTGCCGTTCT
GATCACCGGCACCCACCGATCGCTCTGCGCTAATCTGGCGGCCGCCAATA
ACTTCACCATCGATCACCTGGAGGAGCCCAGCAACAAGGCTCTGGTGGAT
AACGCCCAGTACTACTACATTTCGGGCTTCTTCCTCACTGTGAACCCGCC
AAGCATTATGCAGGTGGCGGCCACCGCCCACGCCAAACAGCGACCGTTCC
TAATGAACCTCAGCGCACCATTCATATCGCAATTCTACATGGCACCGCTG
CTGGCCGCCCTGCCTTACGTGGACATCATCTTTGGCAACGAGGCGGAGGC
TCAGGCGTTCGCCGAGGCCCAGCAGTGGCCTAGCGGGGACCTGCGCGAGA
TTGGCAAGCGACTGGTGGCGATGGAGAAGAAAAACCCGACGCGGCCGCGC
ATTGCCATTCTCACGCAGGGCTGCGATCCTGTACTGCTTATACAGCAGGA
TTCGGTGCAGAATTCCCGGTCACGAAATTGGCGGTGCATGAAATTGTCGA
TACCAATGTCGCTGGGGATGCATTCGTTGGAGGTTTCCTATCGCAGTTTG
TGCAGGCAGTCGCTGATGTCTGCATCAGTGCTGAAACTATGCAGCCGGCA
CATTATCAAGATCAGTTGCACATACTCGGCGACCGGAGTTCGTTGGAGGC
AGCTTTCTAGACCATCGTTTGGCGCCGCAGCCAAGTAATGGTCATAATCT
ATCTAAATCTATCTAATCCACCTAGGCTAAGAATCCTGTCTGGACTATGC
TTGATCCCCAATTACACCTCCGCGGCAACGAGCTTCTGACAACTACAGAT
GGGAGTCTCTT
FMO02751.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AdenoK-RC | 1847 | CG11255-RC | 235..1267 | 24..1045 | 4845 | 98.6 | Plus |
| AdenoK-RA | 1580 | CG11255-RA | 235..1267 | 24..1045 | 4845 | 98.6 | Plus |
| AdenoK-RB | 1387 | CG11255-RB | 61..1074 | 43..1045 | 4765 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13021073..13021555 | 525..43 | 2415 | 100 | Minus |
| 3L | 28110227 | 3L | 13020334..13020827 | 1011..524 | 2160 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:23:50 has no hits.
FMO02751.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:32 Download gff for
FMO02751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11255-RA | 285..1325 | 17..1048 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:42 Download gff for
FMO02751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11255-RA | 229..1269 | 17..1048 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:56 Download gff for
FMO02751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AdenoK-RA | 229..1269 | 17..1048 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:56 Download gff for
FMO02751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13020293..13020826 | 525..1048 | 97 | <- | Minus |
| 3L | 13021074..13021557 | 41..524 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:42 Download gff for
FMO02751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13013393..13013926 | 525..1048 | 97 | <- | Minus |
| arm_3L | 13014174..13014657 | 41..524 | 99 | <- | Minus |
