FMO02753.5prime Sequence
1216 bp (1066 high quality bases) assembled on 2008-05-23
> FMO02753.5prime
CAGTCGACATGGGAAAAATGTTCGCCAGCAGAGGAATGCTGGTGCTTGGA
GTGCTTCTGGTATCAGCAATTGGTGGCCAATCGGAATCGATCCCCTGCAA
ACTCATCGATGCAGAACATGGCAAAGTGTGCGTCTGCACGGCGGACTATT
GTGATTATCTGGAGAATCCCGTCCTGACGGACGAAAATGAGTGGTTCCTT
ATCTCCAGTTCCAAACAGGGACTTCGGTTCTCCACAACTAGTGACAAATT
CGGTAAGGAGGAGAAGTTTACCGTGCAGGATTATGTGGAACCCACGCAGG
AGACTGCGAATGCGACAATCCTGTCTCGTTTGCTCGATAAGGTGGTGGAC
AGTGCTTTTACCTTGGAGTCCCGGGAGAGTTCCATAACTCGCACTGTAAC
CCTGCGACTGGACAGAAGTAAGACCCACCAGAAGATGGTTGGTTTCGGTG
GCAGCTACACCGGAGCAGTGGAATACCTGGTAGAGAACTTCAAGCATTCG
GAACTGGCTGACCATCTGTACAAGTCCTTTTACGCCGAGGATGGACTGGG
CTTCAATCTCATGCGAGTTTCCATTGGCGGCTGTGACTTTGACTTGGAAC
CCTGGTCCTATGCCGAAGAGGAGGGCGACACCGAGCTATCCGATATGGAT
GAACTAAACGCGCATGATGTGACGCGAGTTGCACAGATCAAGCGTCTCAT
TGAGGTGTCCGGAGTGAAGAATCTGTTGGTCAAAGGAGCTGCCTGGAGTT
CCCCGCCCTGGATGAAGACAAACAACAGGTGGACAGGATTTGGACGCCTC
AAGAGGGCTTACTACCAGACTTGGGCCGATTACCATCTGCGTTGGCTAAG
ACTTATGAAGGACAATGGCATTCCCATTTGGGCCATTTCCACGGGCAACG
AACCATTGATGGCATCATTTTCATGTATTTCGTTAAGTTCATGAGCTTGG
GATGGACGCCACAGACTCAGTCATTTGGCTGACGATTATCTGGGTCCCAC
GATCGTACTCTGAGTCAAGACATCCCCCTGTTTGGCAACGATGACCAACG
CTATTCTTTCCCCATTGGTTTAATGATGAACGGCACTCGACAACTCGATT
GATTAACCTGGATGGGCTATCCCCTGCACTTGAATGGATGAAAATTGGCA
CGCCTTATCGACGACAGGATTGGCCCTCGCAACAGATTGTAGTTTCCGAG
AGATCCTGTGCTATAA
FMO02753.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31148-RA | 1777 | CG31148-RA | 35..1181 | 9..1143 | 5270 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23700770..23701779 | 72..1073 | 4630 | 98.6 | Plus |
| 3R | 32079331 | 3R | 23700655..23700720 | 9..74 | 330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:46:55 has no hits.
FMO02753.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:33 Download gff for
FMO02753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31148-RA | 12..1154 | 1..1135 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:01 Download gff for
FMO02753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31148-RA | 29..1171 | 1..1135 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:50 Download gff for
FMO02753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31148-RA | 29..1171 | 1..1135 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:50 Download gff for
FMO02753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23700649..23700718 | 1..72 | 95 | -> | Plus |
| 3R | 23700771..23701783 | 73..1075 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:01 Download gff for
FMO02753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19526371..19526440 | 1..72 | 95 | -> | Plus |
| arm_3R | 19526493..19527505 | 73..1075 | 98 | -> | Plus |
