FMO02755.5prime Sequence
1192 bp (1003 high quality bases) assembled on 2008-05-23
> FMO02755.5prime
CAGTCGACATGAGATTCCAGTTGTTTTATATACTGGGCTTGCTCAGTGTG
ACAAGTTTGACCCATGCTGCCAGCAATCTGATTTGTTATTATGACTCCAA
CTCGTATTTGCGCCAAGGTTTGGCCAAAATGCATACCAACGAATTGGATT
TGGCCCTGCAGTTCTGCACCCATTTGGTTTACGGATATGCGGGCCTGAAG
TCCGGTACCCTCGAGCTATTCAGTCTGAATGTGGACCTGGACATGTTCTA
CTACAAGGACATCACCGCCCTGCGACAGAAGTTTCCTCAACTGAAGATTC
TCCTCAGCGTGGGTGGAGATCGCGATGTGGATGAGGCCCACCCCAATAAA
TATGTAGAGCTTCTGGAGGCGAATCGCACGGCTCAGCAGAATTTTATAGA
CAGCAGCATGATTTTGCTTAAGCGAAATGGATTCGATGGCCTTGATCTCG
CGTTCCAGTTACCCCGTAATAAGCCCAGAAAAGTCCATGGATCCCTTGGA
TCTTACTGGAAGTCGTTCAAGAAGCTTTTCACTGGTGACTTCGTTGTGGA
CCCGCAGGCGGAGGAGCACAAGTCACAATTCACCGATCTCGTTGGAAATA
TAAAGAATGCCTTTCGATCTGCTAATCTGATGCTGTCTCTGACAGTCCTG
CCCAATGTGAACTCCACTTGGTACTTCGATGTCCCCAAACTGCATCCCCA
GTTCGACTATATAAACCTGGCGGCCTTCGACTTTCTCACCCCACTACGAA
ATCCCGAGGAGGCGGACTTCACAGCTCCGATTTTCTTCCAGGACGAACAG
AATCGCTTGCCCCATTTGAATGTGGAGTTCCAGATTAACTATTGGCTGCA
GAATCATTGTCCTGGCCAAAATTGAACCTGGGAATAGCCAGTTATGGCAG
AGCATGGAATTATCGAAGGGATCTGGACTCAGTGATGCTCCCATTGTTCA
TGAGACATGTGAGTTGCACCGGCGAATACAATCCAGAGTGCTGAGGGCTT
ACTAGTGGCATGAGATTTGCTCGAAGTTGTCGCAGACGCATCCGCTCATA
TAAGGAAATGGCGCCCGCTCCGCAAGTCACGGATCTCACCTGAATACGGT
ACTACCTCTCCGCAGCATGATAATGGAATTGCTTGCTGACTCAGAATCGA
ATGCTGATAAGGGAATATGTCCAGGGCCAAGGAGGACTCCGC
FMO02755.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:26:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Idgf1-RA | 1445 | CG4472-RA | 52..1146 | 9..1090 | 5060 | 98.4 | Plus |
| Idgf2-RB | 1796 | CG4475-RB | 1059..1199 | 638..778 | 210 | 76.6 | Plus |
| Idgf2-RC | 1367 | CG4475-RC | 630..770 | 638..778 | 210 | 76.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:26:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16445329..16445990 | 9..670 | 3310 | 100 | Plus |
| 2L | 23513712 | 2L | 16446061..16446448 | 670..1048 | 1470 | 96.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:26:09 has no hits.
FMO02755.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:36 Download gff for
FMO02755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4472-RA | 50..1155 | 9..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:32:31 Download gff for
FMO02755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idgf1-RA | 52..1157 | 9..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:37 Download gff for
FMO02755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Idgf1-RA | 52..1157 | 9..1099 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:37 Download gff for
FMO02755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16445329..16445989 | 9..669 | 100 | -> | Plus |
| 2L | 16446061..16446505 | 670..1099 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:32:31 Download gff for
FMO02755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16445329..16445989 | 9..669 | 100 | -> | Plus |
| arm_2L | 16446061..16446505 | 670..1099 | 95 | | Plus |
