FMO02756.5prime Sequence
1222 bp (1031 high quality bases) assembled on 2008-05-23
> FMO02756.5prime
CAGTCGACATGCGCCAACTGCAGTTGCTTGGTTTTCTGATCGCCATACTG
CAAATCAGCTATATAAGTGCCCAAAACTTGCCATATATCCAGTGTCCGAT
GATATTTCGGTACCTGGAGTACGACAATCAGTTCATTGGACACTTGCAGC
TAACCCTGGATAGTACAAATACGGAGAACGTTGTGCGCGTTGAACTTTCC
CAGCGTGGCAGAAACACCCCGTCGACTCCGGGCACTCTTAACTTCTTGGA
GGATGAGGATTCGCTGAGGCATCGCTTGACTAACAATGAGCCCATCAACT
ACAGAATTGACTTTCCAACGCCGGGCGTGGTGCCCAAACTCACAAAGGTT
ACGGTTAATGGAAAAGTTGCGTGCGAGGCTGTGCCTTTTGGAGCTCCTAG
CACAAGGCTATCTTTGTCGCGAACTCTGCGAACTTCTGTGCCTTTGGCAG
CTATACCGCCGTCTCAGCGGACTGATCACCAATGGCCCCAGGCCCCTCAG
ACCAACTACACTGTATATGAGGAGGAGGAGGAAGAGGAGCCAGTTCAAAG
ACGCCGCCCACAACAGCGTCCTTCGAGGCCGCGTCCACAACAGGCGCCGT
CAAGACCACGGCTGCAACCCGTGCCTCAATTGCCACAAGAACCAGAGTTC
CAGACGTCAGCCAGACCTTCAGTTCATCCGTCGAATACGCCCGCGCAAGC
ATCCAAGTTCTATCCCCAGACAATTGGTCAACTGAGCGGAATCTGTGGGC
GTGAAAAGGTCATCCAGACACCCTTTATCCACAACGGAATTGAAGTGGAG
CGGGGTCAGCTGCCCTGGATGGCCGCTCTTTTCGAGCACGTTGGCAGGGA
CTATAACTTTTTGTGCGGCGGAACGCTGATCTCGGCCAGAACAGTGATCT
CGGCTGCCCACTGCTTCCGCTTTGGCAGTCGGAATTTGCCGGGCGAGCGG
ACTATTGTTTCGCTGGGGCGTACTCCTTGATCTTTTTTCGTCGGAGCTAC
ACTAGGTGTAGCGCGACTATTATCACGACAGTACAATCCCAATGTTACAC
CGATGCGATTTAGCACTGCCTCAGTGTCTAATCACGTTGATTTGCGATCC
TCAGCCCACTGTTTGTGGAACGAGACTTTTGTCAACTTGCCTCGGGTCAA
GTCTATTGCTGTGGGGAGATTGAAGGTACGAAACCCGCACTGTCCCAGAA
TAACAACCGGCTTCTTACTATC
FMO02756.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9649-RA | 1713 | CG9649-RA | 136..1300 | 4..1149 | 5270 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14216008..14216719 | 1090..388 | 3100 | 98.3 | Minus |
3R | 32079331 | 3R | 14217530..14217747 | 221..4 | 1075 | 99.5 | Minus |
3R | 32079331 | 3R | 14216914..14217080 | 387..221 | 835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:22:43 has no hits.
FMO02756.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:37 Download gff for
FMO02756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9649-RA | 118..1275 | 1..1141 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:42 Download gff for
FMO02756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9649-RA | 134..1291 | 1..1141 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:28 Download gff for
FMO02756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9649-RA | 134..1291 | 1..1141 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:28 Download gff for
FMO02756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14216008..14216719 | 388..1090 | 98 | <- | Minus |
3R | 14216914..14217079 | 222..387 | 100 | <- | Minus |
3R | 14217530..14217748 | 1..221 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:42 Download gff for
FMO02756.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 10041730..10042441 | 388..1090 | 98 | <- | Minus |
arm_3R | 10042636..10042801 | 222..387 | 100 | <- | Minus |
arm_3R | 10043252..10043470 | 1..221 | 98 | | Minus |