FMO02757.5prime Sequence
1236 bp (1013 high quality bases) assembled on 2008-05-23
> FMO02757.5prime
CAGTCGACATGAATGAGTCCGAGATCCCCATCGACATACACACGCTGAAG
CTGCAGGACTGGCTGATCAGCCGCAGAATTGTGCCCAAGAATGTGCAGCA
GGAGCTTAGGGAGATCCACAGGAAGATTAGCAACGCCCTGCAGGACATGC
CCTCCAATGAGCAGCTGATCAAGCTGTTGGCCCGGACAAATATCAACTAC
TACCATGTGAAGGAGATCATTGAGATCCTCAAGCAGACGGAGAAGGACAC
CAAGAGCGTGTTCGGCACCTACGGCAGCCAGCGCATGAAGGACTGGCAAG
AGATTAGCCGCCTGTACGAAAAGAATGCCACCTACCTGGCCGAAACGGCT
CAGATTTTCGTGCGCAATGTGAACTACGAGATTCCCGGAGTGCGAAAGCA
GATGGCCAGGCTGGAGCAGCAGGCGGACGAGACCCAGAAGCGAGCGCACG
ATCTGAACAAGCCCGAGAGCCAAATCCTGGCCGACCACTCGGCTTTGCTG
GAGCAACTGGGCGTCAAGGGCGACAATCTGCATGCCGAGTTCGTCCAGGT
TCTATCTGGTCTACCGGAACTATACGATAAGTCGCTGGTGGGCATTGCCA
ATATTCAGCCGGGCATCGACCTGTATGCGGAGGTCAGCGGCAACAAGCAA
GTGCTGCCTATCCTGAACCACCTGGTGGAGTTTGGCAACACCACCGTGTA
CCAGTACATCCACAAGGAAGCACCCTTGGCCGTCGAGGAGCCGCCCATTC
GGCTAAATCTCAGCGAGGGCAACGCCAGCAAGGATGACAATGCTGTGGCC
GAGATTGACTTCGGAACGGATGACAACGGCGGAACTTCGTCGACCGTTTC
GGCTGAGATTATCGACTACGGGACTTCGGCAGCGGGGATTTGCCGGAAAG
CGACGGCGGCAACATCGACTGGGGCATTGAGAGTGCACCCACCGATGCGG
TGGAAATCATTTTGACATTCCCGTCGAGGAGTACGCATCGTGGTGGAGGG
CACCGCATGATGGCGGCACTGCCAAGGCGAATCAGGCCTACCCTTTGCTG
GACTCACCCAACTTATGCGATCGGCTTTCTGACGAAATCTACGACCTGGA
ATTCTTTTTCTACGCATGCATTCTACCGAGCTCAAGCACCTGAATCTCTC
CACGGCACTCTATGTTTTCTCCGTATGACAACATTTGAACCACGCAACGG
TGGAGAGACATCACTGTGGAATATTCTCTCTGTGTT
FMO02757.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30291-RA | 1655 | CG30291-RA | 79..1225 | 9..1152 | 5265 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21008362..21009204 | 1027..190 | 3965 | 99.4 | Minus |
| 2R | 25286936 | 2R | 21009256..21009430 | 189..15 | 875 | 100 | Minus |
| 2R | 25286936 | 2R | 21008228..21008304 | 1107..1031 | 205 | 84.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:14:44 has no hits.
FMO02757.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:39 Download gff for
FMO02757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30291-RA | 76..1228 | 9..1157 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:21 Download gff for
FMO02757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30291-RA | 79..1231 | 9..1157 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:06 Download gff for
FMO02757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30291-RA | 79..1231 | 9..1157 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:06 Download gff for
FMO02757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21008362..21009204 | 190..1027 | 99 | <- | Minus |
| 2R | 21009256..21009430 | 15..189 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:21 Download gff for
FMO02757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16895867..16896709 | 190..1027 | 99 | <- | Minus |
| arm_2R | 16896761..16896935 | 15..189 | 100 | | Minus |
