FMO02759.5prime Sequence
1203 bp (1036 high quality bases) assembled on 2008-05-23
> FMO02759.5prime
CAGTCGACATGTGTCCGATTTCCACGGCTCTTTTTGTAATTGCGGCCATC
CTGGCCTTGATCTATGTCTTTCTAACATGGAACTTTAGCTACTGGAAGAA
GAGGGGCATTCCAACGGCCAAGTCATGGCCCTTTGTGGGCAGTTTTCCCA
GCGTTTTCACCCAGAAACGGAACGTAGTCTACGACATCGATGAGATCTAT
GAGCAGTACAAGAACACCGACAGCATTGTGGGAGTGTTTCAAACCAGAAT
TCCACAACTAATGGTCACAACTCCGGAATATGCGCACAAGATATATGTTA
GTGACTTCCGCAGCTTCCACGACAATGAGATGGCTAAGTTTACCGACAGC
AAAACGGATCCCATTTTGGCGAATAATCCGTTCGTATTGACTGGTGAGGC
CTGGAAAGAAAGACGCGCCGAAGTTACACCCGGACTTTCGGCAAATCGGG
TCAAAGCTGCCTATCCCGTCTCGCTGCGCGTTTGTAAAAAGTTTGTGGAA
TATATAAGGCGACAGAGCCTGATGGCCCCCGCCCAAGGACTAAATGCGAA
GGATCTCTGCTTGTGCTACACCACCGAAGTGATTTCCGATTGTGTCCTGG
GCATTTCCGCCCAGAGTTTCACGGATAATCCCACACCCATGGTGGGAATG
ACCAAGCGCGTCTTCGAACAGTCTTTTGGCTTCATTTTCTACACGGTGGT
CGCCAATCTATGGCCACCAATCACGAAATTCTACTCCGTTTCGCTGTTCG
CCAAGGACGTGGCTGCGTTCTTCTATGACCTCATGCAGAAGTGCATCCAA
GTTCGGCGGGAAAGTCCGGCGGCACAGCAGCGAGATGACTTCCTCAACTA
CATGTTGCAGTTGCAGGAGAAAAAGGACTGAATGCGGCGGAGCTGACCTC
GCACACAATGACATTTTTAACGGACGGATTCGAGACCACCGCACAAGTGC
TTACCCACACACTCTTTTCCTGCACGCAATCCCAAGAGCAAATGAGTTGA
GGGAGGAGATCGTACCGCCGAGCTGACCTTTGAACAGATATGACCTGCCC
TTCACGGAGCCTGCACCATGAAAACTTTGAAATTTCTCACTGTTCTGCTG
CCCGCAAGTGTTACTGACCGTGAACTGACAACCAACCGAATGACGATCTG
AATCGGGGATGATCCTTCTTTCGTTGGAGCCTTGATCACCACGATCCCTG
ATA
FMO02759.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp28d1-RA | 1617 | CG10833-RA | 42..1155 | 8..1108 | 5165 | 98.4 | Plus |
| Cyp28d2-RA | 1673 | CG6081-RA | 94..726 | 61..693 | 495 | 73.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5211190..5211804 | 449..1055 | 2680 | 98.4 | Plus |
| 2L | 23513712 | 2L | 5210501..5210696 | 8..203 | 980 | 100 | Plus |
| 2L | 23513712 | 2L | 5210751..5210889 | 203..341 | 695 | 100 | Plus |
| 2L | 23513712 | 2L | 5210954..5211063 | 342..451 | 550 | 100 | Plus |
| 2L | 23513712 | 2L | 5208022..5208266 | 449..693 | 295 | 74.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:40:40 has no hits.
FMO02759.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:26:42 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:20 Download gff for
FMO02759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp28d1-RA | 36..1172 | 1..1122 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:35 Download gff for
FMO02759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp28d1-RA | 36..1172 | 1..1122 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:35 Download gff for
FMO02759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5210495..5210695 | 1..202 | 98 | -> | Plus |
| 2L | 5210751..5210889 | 203..341 | 100 | -> | Plus |
| 2L | 5210954..5211061 | 342..449 | 100 | -> | Plus |
| 2L | 5211191..5211825 | 450..1075 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:20 Download gff for
FMO02759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5210495..5210695 | 1..202 | 98 | -> | Plus |
| arm_2L | 5210751..5210889 | 203..341 | 100 | -> | Plus |
| arm_2L | 5210954..5211061 | 342..449 | 100 | -> | Plus |
| arm_2L | 5211191..5211825 | 450..1075 | 97 | -> | Plus |
