FMO02761.5prime Sequence
995 bp (992 high quality bases) assembled on 2008-05-23
> FMO02761.5prime
CAGTCGACATGCGGAGTTACATTGCACTCTTGGGGCTTATCCTAACTCTA
AGTGGACAGTTTAACATGCTGCTGGCCGGGAAGAAACATTCCTGCGAGAA
ATTGCTCGCCGATCTTGGCGATGCACAGAGCAAGTTCATCTACTGCGCCA
CCACAAAATCAGTGCCCGTGAATTTGTGTGAGGGCTGCGTCGATCTCTAC
CGCAATCTCACCAATGATTACGGAAACCTAATTGCGAACGCCAACTGTTC
CAAGCGTTATCTGAACTCGGACAGGATCAATATAGTGGCTACCACCCAAG
GAATCCTAACTAGCCTGTGGCAAAAGGCCAACTGCGAAAATTGCTTCAGG
GATAATTTTTGGATTGTATACAGCGATAACTCAACAAAGTTGCAAAATTG
CTTAGAATCTGCTAGTTCGGATTTAGTTTGCTTCAAGTGCAAAAATGATT
ACGTGAGTCTAAATGATTTCTACCTTAGCATGGAAAAGAAAGTCGGTGGA
AGTGTGTGCTTCGATCTGCAGGACAATATGAACCGGACTCGTCTGAATTG
GTCGAAAACGCTGAAATGCTGTCAACGCGAGGTGAAGCTGACCAATTTTC
TCATCGCCGTTGGCGTAGTTGTCCTGCTGCCCATTTTCACCTTCTATATT
ACGGCAGTTGTAGTGACCAAGCGGCGGGAGGCCAATCATGGCTTGCTCAA
TGAGCAGGAACCTGAACTGGACGCGCCCTCCACGTCGACGCTTATCACGG
CTGCCGTGCTGTCCACTTCAACAGAGGATCCTGTTGCAATCTCCGCCCGA
ACAGAAAAGATCGCCAATGTATTGATCGGTGCTGGAACACACCTGTTGGA
CGAGTCCAGTGATGAAAAACCTCCTAAGAGGAAAAAGGTGCTCACAGTCC
CGCATCCGACTACTCCAGTGAAGAAGAGCCTCTTGAAAGCCCAAACGCGC
GGCAAGCTTTTCAAGACATTCGTTTGGCGGCGCGGGCCCAAGTTA
FMO02761.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14969-RA | 1636 | CG14969-RA | 363..1307 | 9..951 | 4600 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3334227..3334557 | 339..9 | 1655 | 100 | Minus |
| 3L | 28110227 | 3L | 3333448..3333693 | 951..708 | 1055 | 97.2 | Minus |
| 3L | 28110227 | 3L | 3333984..3334171 | 527..340 | 940 | 100 | Minus |
| 3L | 28110227 | 3L | 3333745..3333925 | 708..528 | 905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:14:25 has no hits.
FMO02761.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:44 Download gff for
FMO02761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14969-RA | 363..1310 | 9..955 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:28 Download gff for
FMO02761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14969-RA | 363..1310 | 9..955 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:57 Download gff for
FMO02761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14969-RA | 363..1310 | 9..955 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:57 Download gff for
FMO02761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3334227..3334557 | 9..339 | 100 | | Minus |
| 3L | 3333432..3333692 | 709..967 | 93 | <- | Minus |
| 3L | 3333745..3333925 | 528..708 | 100 | <- | Minus |
| 3L | 3333984..3334171 | 340..527 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:28 Download gff for
FMO02761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3333432..3333692 | 709..967 | 93 | <- | Minus |
| arm_3L | 3333745..3333925 | 528..708 | 100 | <- | Minus |
| arm_3L | 3333984..3334171 | 340..527 | 100 | <- | Minus |
| arm_3L | 3334227..3334557 | 9..339 | 100 | | Minus |
