FMO02764.5prime Sequence
1233 bp (1010 high quality bases) assembled on 2008-05-23
> FMO02764.5prime
AAAAACAAAGTTATCAGTCGACATGTTAAGCAGCCTCGCCTCGTATCTCT
TTGGATCAGCTACATCCGATTCCATTAGCCAAGAAGCCAATCCCGCCCAG
AACCGAACGAACGCCTCGAACGCGAACTCTAGCTCGAGTCCCGGCCCGAC
CAGCGATCCCGCTGCAGGCGATGTAATTGAGGTCACCTCCTCGACGCCCT
CGGTAGCGGGCAGCAGTCGTGGGGCGGTGCGCGCCTCCAACGGCAAGCGG
GGCAAGAACAGGCGTGGCAAGCAGCAGCGGACCAACCAGCAGCAGCGGAA
ACAACAGCCAGCGATCACCAAATTGCTGACGCCCTCCGGCGAGATCGTCG
ACGAGGACTTCGACGAGGACGAATGGTACATTGTGGAGAAGGAAGACGAG
GAGGACGACTCCCTGCCACGCAGCGACTCCGAGGAGGAGCTCTCCGTGGT
GGAGGTGTCGCAGCCGCGGGGCGGTTCCAACAACGCCTCCTCTCCAATGG
TGACCGTGGCCACTGGCACGGCGTTCAACTGCCGCCGCCGGCAGGGCGTC
AACTCGTGTTCCCTGTACAGTGGGCCCCGGCCGCAGCAGCAACGCAACTA
TCTGCAACGCTCGCGCGTCTCCCGGCCGCTGAGCATCAGCACCCTCAGCC
CGCCCAGAAGTGTGCCCGCCCTGGGGGCCGGCGATCATGACACGCTGACC
CAGTCGCTGTACGTGGCCTCGCCGAGCGGCAGCGACCAGGGTCAGGATCA
CGGCCAGCGTGCTAACGTGCTGATGGAGGAGTCCTGCATGTCCGTTTATC
ATAGTATTAGGTCCACCCAGGAGGGAACCGATAGTTTTGTTAATCTTGAT
CTCGGGGTGTCGACGGAGTGCCGCAGCAGCGGGAGGAGCCCGAGCCGGAG
GCTGAGCCGCAGGATCAGCGCCAGGCTCTCCAGGAGCAGCAACGTTGCCC
CCAACGCTCGCTTCAAAAGCCATGCGCCGTACAGTTGAAGCAGCAGAACG
CTGGCCTCGTCAGAGTCAGAAGAGCAGAACAAGAGGGACCACAGCAGCTC
TGCCCGCAGGGCATCAAGCGGGCCAACAGGTGTGCGCGACTTCCAAGCAG
GTCAACGCCGGGGGCGGTCGGAAGTGCAATCTGCAGCCGTGTAAGGGCGC
CAAACAACCGACAATGTGCTGTCAGCAAGGCCTCTAGACCTTCTTTTGGG
CACGGCGGGGCCGGAGTAAGGGTGGTCCTATAT
FMO02764.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DOR-RE | 1906 | CG11347-RE | 381..1453 | 23..1095 | 5035 | 98.4 | Plus |
| DOR-RA | 2022 | CG11347-RA | 497..1569 | 23..1095 | 5035 | 98.4 | Plus |
| DOR-RB | 2311 | CG11347-RB | 404..1476 | 23..1095 | 5035 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4418780..4419172 | 394..786 | 1950 | 99.7 | Plus |
| 3L | 28110227 | 3L | 4418122..4418494 | 23..395 | 1865 | 100 | Plus |
| 3L | 28110227 | 3L | 4419428..4419663 | 786..1022 | 915 | 97.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:22:50 has no hits.
FMO02764.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:46 Download gff for
FMO02764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11347-RE | 371..1461 | 17..1106 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:47 Download gff for
FMO02764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DOR-RB | 399..1489 | 17..1106 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:31 Download gff for
FMO02764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DOR-RB | 399..1489 | 17..1106 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:31 Download gff for
FMO02764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4418117..4418494 | 17..395 | 99 | -> | Plus |
| 3L | 4418782..4419172 | 396..786 | 99 | -> | Plus |
| 3L | 4419429..4419663 | 787..1022 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:47 Download gff for
FMO02764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4418117..4418494 | 17..395 | 99 | -> | Plus |
| arm_3L | 4418782..4419172 | 396..786 | 99 | -> | Plus |
| arm_3L | 4419429..4419663 | 787..1022 | 97 | -> | Plus |
