FMO02767.5prime Sequence
1214 bp (1033 high quality bases) assembled on 2008-05-23
> FMO02767.5prime
CAGTCGACATGCCCAGCAGTTTTGCCAACGAGAGTCAGTTCCGATACCAG
AGCAGCCGCAATCGTGCCAGCTGCACAAGCCGGAGTCCCAGCGAGCCGGA
ATCCCCGGCGCCGGTGACGCCCAATTGCGATGTAGTCGATCAGGCGCTGG
CCGAGCTGCAGCTCCAATCGCAGGACATACGCAAGCAACAGGACCTGGTG
GACACCACAGCCACGAGCAGCAGCAGCCGAAAGCGTTCCGGATGGGAGAT
AAAGGGCTCCAAGCTATCCCTTAACACGCACAATCGCATTCGGAACATTG
TCGAGTCGCTAAAGATCAAACCGAATCCGGAGAAGCCCATGATACCGCTG
TCCATTGGTGATCCCACAACCTTTGGCAATCTAAAAGCCGCCGATGAGAC
AATGAAGGCGGTGCTGCATTCCCTGGAGAGCGGCAAGTACAATGGGTATG
CCAGCACCCAGGGTCACGAGATAGCCCGCAAAGCGGTGGCCAAATACAGT
GCCCACCAGCGTCCCGACGGAGAGATCGATGCCAACGAGGTGGTGCTGTG
CAGCGGCTGCTCCTCCGCCTTGGAGTACTGCATCCTGGCGCTGGCGGATC
GTGGTCAGAATGTTCTGGTGCCGCGACCGGGTTTCTGTTTGTACTATACG
CTGGCCCAGGGCTTGGATATCGAGGTGCGCTACTACGATCTTCTGCCCGA
TCAGCAGTGGCGCGCCGATCTCGTTCAGCTAGAGAGCCTGATCGATGAGA
ACACCGCCGCCCTTTTGATCAACAATCCGAGCAATCCCTGTGGCAGCGTC
TTCGATGAGAAGCATCTGCGCGAGTTGATAGCCATCTGCGAACGCCACTA
TCTGCCCATCATTGCCGATGAGATCTATGAGCACTTTGTGTTCCCCGGCT
CCAAGCACTTGGCCGTGAGCAGCCTGACCACGGAGGTCCAGTTCTCTCTG
TGGCGGGTGACCAAACGCTTCCTGGTCCCGGTGGCGATGGGTTGGATCAT
AGTGCACGATCGCAGATCGTTTGGGCGATGCCATTGTTCGTCTAAGAACT
GTGTGGTCCGCATTCTGGCTCCAATACATCATCAGGTGCCCTGCGAATTC
CTGAACAGACCCGAACTTATTTGACGGCCGTATGAGTGTCACTGAAGCAT
GCTGCTACAAAAGTGCTTGACAGGTGTGCCGTGGCTTCGTCATCTCCGAG
TAAGTGTCCCCACT
FMO02767.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1461-RB | 2509 | CG1461-RB | 363..1461 | 9..1094 | 5080 | 98.4 | Plus |
| CG1461-RA | 1974 | CG1461-RA | 363..1461 | 9..1094 | 5080 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14263449..14263964 | 357..872 | 2580 | 100 | Plus |
| X | 23542271 | X | 14261585..14261937 | 9..361 | 1765 | 100 | Plus |
| X | 23542271 | X | 14264029..14264211 | 871..1045 | 495 | 92.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:40:50 has no hits.
FMO02767.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:50 Download gff for
FMO02767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1461-RA | 357..1461 | 3..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:27 Download gff for
FMO02767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1461-RA | 357..1461 | 3..1094 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:41 Download gff for
FMO02767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1461-RA | 357..1461 | 3..1094 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:41 Download gff for
FMO02767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14261579..14261933 | 3..357 | 99 | -> | Plus |
| X | 14263450..14263964 | 358..872 | 100 | -> | Plus |
| X | 14264031..14264265 | 873..1094 | 92 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:27 Download gff for
FMO02767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14155612..14155966 | 3..357 | 99 | -> | Plus |
| arm_X | 14157483..14157997 | 358..872 | 100 | -> | Plus |
| arm_X | 14158064..14158298 | 873..1094 | 92 | == | Plus |
