FMO02773.5prime Sequence
1204 bp (1009 high quality bases) assembled on 2008-05-23
> FMO02773.5prime
CAGTCGACATGAGCTACAGAGTCCAGCCGAGCGGCTTCGCCACCAAGTCC
ATCCACTCGGGCCAGAGCCCCGACCAGTGGAAGAGTGCTGCCGTGATTCC
GCCGATATCGCTGAGCACCACCTTCAAGCAAGATGCACCGGGCGAGCACA
GGGGCTATGAGTACTCCCGCAGTGGAAATCCCACTAGGAACGTGCTGGAG
ACGTGCTTCGCCGCCTTGGATAATGCCAAATACGGCCTCACGTTCTCATC
GGGATTGGGAGCCACCACCGCTGTGCTAACTATGCTGAGCAGCGGCGATC
ACATCATCATGGGCGACGATGTTTACGGAGGCACCAACCGTTTGATCCGA
CAGGTTGCCACCCGTCTGGGAATCTCAGCCACCTTTGTGGATCCCACGAA
GTTGGATCTAATTAAAAGTTCCATCAAGCCGGAGACCAAGTTGGTGTGGA
TCGAGTCACCAACTAATCCATTGGTAAAGGTAGCCGACATCGAGGCTATT
GCGCAGCTGGTCCATGGAGTACGCGAGGATATCGTCCTGGCCGTCGACAA
CACCTTCCTGACCTCCTACTTCCAGCGACCCTTGGAGCTGGGCGCTGATC
TGGTCTGCTACTCCCTGACCAAGTACATGAACGGTCATACGGATGTGGTC
ATGGGTGGCATCACCATGAACTCGGAGAAGCTCTACAAAAGCTTGAAGTT
CCTGCAGAACGCAGTGGGCATTGTGCCGTCTCCATTCGACTGCTATCAGG
TGAACAGAAGTCTTAAGACGCTCTCGCTGCGCATGGAACAGCACCAGAAG
ATGCTCTGAAAGGTTGCCAAATACCTGGAGACGTATCCGTTCGTGGAGAA
GTGTTGCATCCCTCTTTGCCCTCCCATCCGCAGCACAAGATCGCTCTGAA
GCAGCATACGGATACAGCGGCGTGTTCTCCTTCTACATTAGGCGAGCTGA
GCACTCTCGGCTTTCTCAAGGCCTCAAGGTGTCACCCTGGCAGAGAGTCT
GGGTGGCTACGAAGAGTCTGGCCGAGCTCATCAATATGACCCATGCCTCG
GTCACGGAAGAAAGAACCTTTGGCATCCTGAACGTCTAGTCGCTGTCCGT
CGACTGAGATGCCCATGATTGATCAAGAATTGGAACAGGCCTGATGATCC
AGTCTAGGCCTTCAGACATCTTGGCGCCGCGCGGCGCCCAGGAAGGGTCC
TATA
FMO02773.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip55E-RB | 1478 | CG5345-RB | 78..1235 | 9..1141 | 4980 | 96.7 | Plus |
| Eip55E-RA | 1362 | CG5345-RA | 78..1235 | 9..1141 | 4980 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18627995..18629049 | 9..1052 | 4590 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:47:37 has no hits.
FMO02773.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:49:55 Download gff for
FMO02773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5345-RA | 94..1168 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:31 Download gff for
FMO02773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip55E-RA | 70..1144 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:15 Download gff for
FMO02773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip55E-RA | 70..1144 | 1..1061 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:15 Download gff for
FMO02773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18627987..18629061 | 1..1061 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:31 Download gff for
FMO02773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14515492..14516566 | 1..1061 | 97 | | Plus |
