FMO02779.5prime Sequence
1212 bp (1015 high quality bases) assembled on 2008-05-23
> FMO02779.5prime
CAGTCGACATGGCACGCGACACACAAGGAACGCAGGGAACCCAGAGTCAG
GCCTCCAATATCTGGACGCAGGTGGAGAGCCAGCCGATGGAGAAGATAGT
CTGGGGTCGATTGTACGGCAAGAACATTAAGATCAAATCGCTGGATCTCA
ACAACGACGAGTTCACCGCAGGACGAGGGGAGGCCAACGACTTGATCCTC
ACGCTCAACGATTTGCCCGAGAAAATCCTGACGCGCATTTCCAAAGTGCA
TTTTATCATAAAGCGGGCAAACTGCGAACTTACCAATCCAGTTTATATTC
AGGATCTCTCACGCAACGGGACGTTTGTGAATAACGAGAAAATTGGCACA
AACAGGATGCGAATCCTAAAGAATGACGACGTAATTTCCCTGTCCCACCC
AACGTACAAAGCCTTTGTATTCAAGGATCTCAGCCCGAATGAGTCGATCG
GGCTTCCCGAGGAGATTAACAAGACGTATTATGTAAATCGCAAGCTGGGA
TCTGGAGCGTACGGACTGGTGCGTTTGGTCTATGACACCCGCACCTGCCA
GCAGTTTGCGATGAAAATCGTTAAGAAGAATATGCTCTCTGGGGCGCGAC
CCAGTACCAATTTCAGTGATCCCGACCGGGTGCTGAACGAAGCCAAGATT
ATGAAGAATCTTTCACATCCGTGCGTGGTTCGCATGCACGACATCGTGGA
CAAGCCGGATTCTGTGTATATGGTGCTGGAGTTTATGCGCGGCGGCGACC
TGCTTAACCGGATCATCAGCAACAAACTACTTAGCGAGGACATCTCGAAG
CTTTACTTTTACCAAATGTGCCATGCCGTCAAGTACCTACACGATCGGGC
ATCACCCATCGTGACCTTAAGCCTGACAATGTTTTGCTGGAGACCATGAC
GAGGAGACCCTACTGAAGGTCTCCGATTTCGGGCTGAGTAGTTTGTGCAG
AGGACTCGGTTATGCGCCCGCTCTGTGCACACCTCTCTACGTGGCCCCTG
AGTGCTGATACCGGCGCCGATAGCCTACACAGAAGTGACTTTGAGCTGGA
TGGTGCTATTTTCTGCCTGACTGGATCTGGCCCTTCGACGAGATCGGCAC
CCCGGCGTCCAGCAAATAAGAGGGCAATTCCGATGGACCTCTTGGAAGGT
TCGAGCGCCCAGATGCGATTACCACGATGTCTCTATACTTGAGTGTGGGT
AATTCCCACGAG
FMO02779.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lok-RC | 2163 | CG10895-RC | 381..1515 | 9..1119 | 4960 | 97.1 | Plus |
| lok-RB | 2105 | CG10895-RB | 320..1454 | 9..1119 | 4960 | 97.1 | Plus |
| lok-RA | 2231 | CG10895-RA | 581..1580 | 144..1119 | 4285 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20062732..20063171 | 410..849 | 2200 | 100 | Plus |
| 2L | 23513712 | 2L | 20062147..20062306 | 144..303 | 800 | 100 | Plus |
| 2L | 23513712 | 2L | 20061877..20062012 | 9..144 | 680 | 100 | Plus |
| 2L | 23513712 | 2L | 20063377..20063535 | 848..1002 | 580 | 96.9 | Plus |
| 2L | 23513712 | 2L | 20062542..20062653 | 300..411 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:00:36 has no hits.
FMO02779.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:50:01 Download gff for
FMO02779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10895-RB | 332..1338 | 1..1002 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:14 Download gff for
FMO02779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lok-RB | 312..1318 | 1..1002 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:35 Download gff for
FMO02779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lok-RB | 312..1318 | 1..1002 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:35 Download gff for
FMO02779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20061869..20062012 | 1..144 | 97 | -> | Plus |
| 2L | 20062148..20062305 | 145..302 | 100 | -> | Plus |
| 2L | 20062545..20062653 | 303..411 | 100 | -> | Plus |
| 2L | 20062734..20063171 | 412..848 | 99 | -> | Plus |
| 2L | 20063378..20063535 | 849..1002 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:14 Download gff for
FMO02779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20061869..20062012 | 1..144 | 97 | -> | Plus |
| arm_2L | 20062148..20062305 | 145..302 | 100 | -> | Plus |
| arm_2L | 20062545..20062653 | 303..411 | 100 | -> | Plus |
| arm_2L | 20062734..20063171 | 412..848 | 99 | -> | Plus |
| arm_2L | 20063378..20063535 | 849..1002 | 96 | == | Plus |
