FMO02790.5prime Sequence
1065 bp (1000 high quality bases) assembled on 2008-05-23
> FMO02790.5prime
AAAAACGAAGTTATCAGTCGACATGCTTGAGACCGAGGTGCTGCAACAAC
CGAAGCTGAGTGGACCGGCTGCCAGTAGCGGCGGCGACTATGACTATCCG
TATGTCTGCGGACTGAGTCCGGCAATGAAGCTGGTGGCCAAGGAGGAGCT
GCACGAGGACGAGAACATACGTCGGCAGGCGCTGGCCCAGTTCCGCGAGT
GGATCGAGAAGCATCCGCATATCCGCAAGTGCCGCACCGATACCGTCTTC
CTGCTGCGTTTTTTGCGCACCAAAAAGTTCTCCGTACCATCCGCCTGCGA
AATGCTCGAGCGCTATCTGACCATCCGGCAGCTGTTCCCGCAGTGGTTCA
AGCAGCTGGACATCAACGATCCGGCCATCAATGAGATCTTCGAGAATGGT
TATCTGGTGCCGCTGCCGCAGCGCGATTCCACCGGACGTCAGGTCATCTT
CTCCGTGGCCGCCAAGTTCGATCCGTACAAGTTCACTTCGGTGCAAATGG
CGCGGGTGCACAGTCTGGTCTGCGAGGCACTGCTGGATGATGAGGATTCT
CAGGTGGCTGGATATGTGTACATCAACGACGAGAGTGGCATGAACATGGG
CTTCGTTAGCCTCTGGTCTCTGACCGACCTGCGCAGCATTGTCAAGTGCA
TCCAGAACTCGACGCCGATGCGGCACAAGGAGACGCACTTCGTCAACATA
CCCCACTACGCCAATCGCATCATCGAGCTGGGCGTGTCCATGCTGAGCGA
TAAGCTTAAGAAGCGAATCATTGTGCACAAGAATGTTGACATTTTGAAGA
CAAAGATCGATCCCGCCATCCTGCCCAAAGGAATATGGTGGCACCGTGCC
CATTTCCCGATATGATCGCCCAGTTCAAACAGAAGTTGCAGCACGCCGGG
GCGGCATCCCTTGCACTCGACGACATGCAGATCGAGGTGACCAGGATGCG
GCATTTTGCTGGTATGATATCGCGACATCGATGCGGTGTCGTGGGCAGTT
TAAGGAACTGGAAGGTGACGCAGCTTTCTAGACAATCGTTTGGCCGCGCG
GGCCCAGGTAAGTGT
FMO02790.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10657-RA | 1524 | CG10657-RA | 207..1201 | 23..1012 | 4665 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12492813..12493274 | 485..24 | 2295 | 99.8 | Minus |
| 3L | 28110227 | 3L | 12492458..12492753 | 775..480 | 1480 | 100 | Minus |
| 3L | 28110227 | 3L | 12492159..12492397 | 1007..773 | 720 | 93.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:24:15 has no hits.
FMO02790.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:50:08 Download gff for
FMO02790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10657-RA | 189..1187 | 23..1017 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:33 Download gff for
FMO02790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10657-RA | 207..1205 | 23..1017 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:07 Download gff for
FMO02790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10657-RA | 207..1205 | 23..1017 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:07 Download gff for
FMO02790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12492149..12492397 | 773..1017 | 93 | <- | Minus |
| 3L | 12492461..12492751 | 482..772 | 100 | <- | Minus |
| 3L | 12492817..12493278 | 18..481 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:33 Download gff for
FMO02790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12485249..12485497 | 773..1017 | 93 | <- | Minus |
| arm_3L | 12485561..12485851 | 482..772 | 100 | <- | Minus |
| arm_3L | 12485917..12486378 | 18..481 | 99 | | Minus |
