FMO02793.5prime Sequence
1214 bp (982 high quality bases) assembled on 2008-05-23
> FMO02793.5prime
AAAAAACAAAGTTATCAGTCGACATGGCGGATCCGGAGGATTATGATCTG
AACTTTGTTCAGCTGAGTCGCCAGCAGGCGCTGCAGCGATATGCGGGTGC
AGTGCGTCAGCTGCGCCGGCTGGCTGATCAGCGGTACGGTGTGCGATCCC
TTAGCTTCGACAATTATGTGCTGTTTCAGTATTTCCGGCAACGCAATTGG
CAAACTGGCGTCACGCCACCCGCCCCCTTAATGGCCTACCTCAAGCTTGA
GGTACTGCATCATCTGCTGGACCGACGACGACAGATCCTCTGCTGGCTGT
TCTACCTCACGGTGGTGTCGCTCTGCGTGGCCGCCTACCGTTATGAGGTA
ACCAGCTCCACCGGCGGACATCAGGAGCGCGTTGTCCAGGCCATGGTCTA
TCCCGGGATGCGCATGTGGCGGCGGATGACCATGCCGCTGATCCAACGAT
TCCCACAGCTTACCGAACTCTACGACGAGTCCTGCCTGATGGGCAATCCG
TTTTTTCAGCTAGAGGATCTGAGCTGCGGACCGTGTGCCGAAGTGGAGAC
CGTCTGGCTGGAGGGCGAGGAGTGTGCAAATGGTCATCCGCTGGAGTACC
ATCAGAACCACAAGTGCCATCAGCCGGAGGGATCGCCCATCGCCTTTAGG
AGCAACCAGCAGGAGTCCATTGACTTGAGCCACTTCTACAACATCTACGC
TAGCAATCATCAGATCTTCCAGCGCGACGCGTATCGGGTGCACTCGACCA
ACCAGGATGTGCACAATCTTGAGGATCTCTTTGGGCAGTTCAACAGCAGC
TGGACCCAGCAGGCGCACAATCTTTGGCGCTGCAATCGCATGCTGCCCGC
GCGACTCCTGCGTCCCATTTTCGCCGGTCAACGCGATTGCCCAGCATGGG
CGTGCCCTGGAGCGTATGTGGCCATCGATACTGCCCAGGCGCCGGCCTAC
ACATTGCCGGAAACGGAATGCCCATGTCTATATCACCAGCGGTAGCACGC
GTTCATCATCTGCGACTCACCATGGATGCCGGCACCGCTGTCGCACTTTG
TCTCTGCAACTACCAGTCCTTTGTGCGTGGATACGTTTCGAATGCTTTGG
TCGGCCACACAATCACATCGAGTTCACTTTAAGATACTGCAATCTTCGAA
CATTCCAGGCGCCGTCCGTAGTGTCAATTACTATTCCATTACTTATACTA
CACCCACACATGCT
FMO02793.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4558-RA | 2115 | CG4558-RA | 217..1306 | 23..1098 | 4975 | 97.9 | Plus |
| CG4558-RB | 1868 | CG4558-RB | 217..1283 | 23..1076 | 4930 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6849986..6851075 | 23..1098 | 4670 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:44:16 has no hits.
FMO02793.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:50:14 Download gff for
FMO02793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4558-RA | 210..1307 | 17..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:07 Download gff for
FMO02793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4558-RA | 212..1309 | 17..1101 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:54 Download gff for
FMO02793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4558-RA | 212..1309 | 17..1101 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:54 Download gff for
FMO02793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6849981..6851078 | 17..1101 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:07 Download gff for
FMO02793.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6744014..6745111 | 17..1101 | 97 | == | Plus |
