FMO02796.5prime Sequence
949 bp (943 high quality bases) assembled on 2008-05-23
> FMO02796.5prime
GAATATACCAAGTTATCAGTCGACATGACTAAAGACAGATTACCCGCTCT
CCATGCCGCCCAATCCGATGACGAGGAGGAGACGGAGGTGGCCGTCAATG
TGGATGGCCATGATTCCTACATGGACGACTTCTTCGCCCAGGTGGAGGAG
ATCCGCGGGATGATCGACAAGGTGCAGGATAACGTCGAGGAGGTAAAGAA
GAAGCACTCGGCCATCCTGTCCGCCCCACAAACGGACGAGAAGACCAAGC
AAGAGCTGGAGGATCTGATGGCCGACATCAAGAAGAATGCCAATCGCGTT
CGCGGCAAGCTCAAGGGCATCGAGCAGAACATCGAGCAGGAAGAGCAGCA
GAATAAGTCGTCGGCGGATCTGAGAATTCGGAAGACGCAGCACTCGACGT
TGTCACGGAAATTCGTCGAAGTGATGACCGAGTACAATCGCACGCAGACC
GACTACCGAGAGCGCTGCAAGGGAAGGATACAGCGTCAACTGGAGATTAC
CGGACGACCGACCAACGACGATGAGCTGGAGAAGATGCTGGAGGAGGGCA
ACTCGTCTGTGTTCACGCAGGGCATCATCATGGAGACGCAGCAGGCCAAA
CAGACGCTGGCGGACATTGAGGCCCGCCACCAGGACATCATGAAGCTGGA
GACATCGATCAAGGAGCTGCACGACATGTTCATGGACATGGCCATGCTGG
TGGAGTCGCAGGGCGAGATGATCGATCGCATTGAGTACCATGTGGAGCAC
GCTATGGACTATGTGCAGACGGCAACTCAGACACCAGAATGCGCTCAAGT
ACCAGAGTAAAGCCCGACGAAGAAGATCATGATACTGATCTGCCTCACTG
TGCTGGGCATCTTAGCGGGCCTCATATGTTAGCAGTTATTTCATGGCAAG
CTTTCTAGACCTTTCGTTTGGGCGCGCCGGGCCCAGGGTAGTGGTCACA
FMO02796.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx1A-RA | 2385 | CG31136-RA | 1321..2193 | 25..895 | 4240 | 99.3 | Plus |
| Syx1A-RB | 2639 | CG31136-RB | 1321..2192 | 25..894 | 4235 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24103571..24104443 | 895..25 | 4140 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:39:57 has no hits.
FMO02796.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 15:48:23 Download gff for
FMO02796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31136-RA | 1301..2180 | 25..902 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:54 Download gff for
FMO02796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx1A-RA | 1321..2200 | 25..902 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:10 Download gff for
FMO02796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx1A-RA | 1321..2200 | 25..902 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:10 Download gff for
FMO02796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24103564..24104443 | 25..902 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:54 Download gff for
FMO02796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19929286..19930165 | 25..902 | 98 | | Minus |
