FMO02817.5prime Sequence
1231 bp (520 high quality bases) assembled on 2008-06-10
> FMO02817.5prime
AACTTCGTATAGCATACATTATACGAAGTTATCAATCCACATGAGTTGCT
ACAGAAAAAGGCACTTTCTATTGTGGCTCTTGCGTGCTGTGTGTATGTTG
CACTTAACCGCGAGAGGGGCATATGCCACAGTTGGGTTGCAAGGAGTGCC
GACATGGATATATCTCGGCCTCAAGTCCCCCTTCATCGAGTTTGGCAACC
AGGTGGAGCAGCTGGCCAATTCCAGCATACCACTGAACATGACCAAGGAC
GAGCAGGCCAATATGCATCAAGAGGGCCTACGCAAGCTCGGTACGTTCAT
AAAGCCAGTGGACCTGCGGGACTCGGAGACTGGCTTCGTCAAGGCCGATC
TCACCAAGAGACTGGTATTCGATAGACCGAACAACATTACATCTCGCCCT
ATTCACCCGATACAGGAGGAGATGGATCAGAAGCAGATAATCCTGCTCGA
CGAGGATACCGACGAGAATGGCCTGCCAGCCAGTCTCACCGACGAGGATC
GCAAGTTTATAGTGCCGATGGCGCTCAAAAATATATCGCCCGATCCACGC
TGGGCGGCCACTACACCGAGTCCCTCCGCTTTGCAGCCGAACGCTAAAGC
CATCTCGACCATTGTGCCCTCGCCTCTGGCCCAGGTCGAGGGGGATCCCA
CGTCCAACATCGATGACCTGAAGAAGCACATACTCTTCTTGCACAACATG
ACCAAGACCAATTCGAACTTCGAGTCGAAATTCGTTAAATTCCCGAGCCT
GCAAAAGGACAAGGCCAAGACATCGGGAGCTGGCGGTTCGCCGCCCAATC
CCAAGCGGCCCCAGCGGTCGATTCATCAGTATTCCGCGCCCATAGCCCCA
CCAACTCCCAATGTGCCCGCGCCAGATGGCGGCGGCGTAGACGAGCAGCT
TACAATCCCGGAGAGCAGCCAATTGGTGGCTACTATCAAACGAGGACTAG
ACGAATATCAATCCCTTCATAAACAACAGAAACCGACTCCATCCAGCGGC
CGGCGGTAGCAGCATGACAGAAGATCCCAGCAAGCTCAGTGATACTGCTC
ATCGAAATCTTCTCCACGAGACTCATCGAGCGGGATCGCAGATCAATCGA
AAACAGCCAAAGGCGGATCGCCTGCGCGCATCAACAAGCTGACCACTGCT
GCCAATCGAGTCCGATGCTCGTAGTGGCGGAGAGACACACCTGCACGCGG
AGCGGAACAGATTGCGTCTACGGCGCTCGCT
FMO02817.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt5-RB | 4005 | CG6407-RB | 554..1664 | 41..1137 | 4770 | 96.5 | Plus |
| Wnt5-RA | 3850 | CG6407-RA | 554..1664 | 41..1137 | 4770 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18503875..18504852 | 1013..41 | 4460 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:59:06 has no hits.
FMO02817.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-06-10 14:37:46 Download gff for
FMO02817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6407-RA | 549..1572 | 35..1051 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:38 Download gff for
FMO02817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 551..1574 | 35..1051 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:15 Download gff for
FMO02817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 551..1574 | 35..1051 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:15 Download gff for
FMO02817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18503832..18504855 | 35..1051 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:38 Download gff for
FMO02817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18397865..18398888 | 35..1051 | 97 | | Minus |
