FMO02818.5prime Sequence
1223 bp (972 high quality bases) assembled on 2008-06-10
> FMO02818.5prime
TTCGTATAGCATACATAATACAAAGTTATCAGTCGACATGGCGGCCAGGA
GCGTGCGGCTAGCGCAGCTTTTGCTATTTACCCTGCTCTGCGGCTTCGTC
GGCCTGTCAGCCGCCAAGCACCTGGACCTGGATGGTATCCACCACCACCA
GCACCACCTGCACAGCGCCACCACGCACCACAGACGTCGCCTACAGCGGG
ACTCGCGGGCGAAGGACGCCGTTGGGGGATCGACCCACCAGTGTGATGCC
GTCAAGAGCTACTTCGAATCGATCGACATCAAGTCGAGTGGGACTTACAG
CGAAAAAGGCGCCATTTGTGGCGGAAACTGCTGCAACAATGCCACGGAGC
TGGAGCTGCGGGACAAAGCCGCCGGAATGTTCGAGCAACTGCTTCATCAT
CACACCAGCAGCCTGCGCGGAGTCCTCGAGACGAATGCCAAACAGTTCCA
AAGTCACGTCCTGGAATTGGCGCAGATTTCGGAGAACATGACCCACTCGC
TCTTTTCGAAGGTTTATACCCGTATGGTGCCTTCATCGCGTATGATGATC
CATCAACTGTACACCGAAATCATGAACCATCTGATTTACACCTCCAACTA
TACGAACAGCAATGGCCAACTGGGCAGGCGAGGAATTGGCAGTGTCCAGA
GCAACTTGGAGGAGGCTGTCAGGCACTTCTTTGTTCAGTTGTTCCCCGTG
GCCTACCACCAGATGGTCCATCTGTCCAAGAACAATTTGGGTGACTTGCA
CGAGGACTACGTTAACTGCCTGCAGCACAACTTCGACGAGATGCATCCAT
TCGGGGACATTCCCCAGCAAGTGCAGTCCAACTTGGGCAAGAGTGTCCAT
ATGTCCAATGTCTTCATGAATGCCTGCTCCAAGGCCGCCGAGGTCCTCAG
CGAAGCGGATGCCCTTTATGGCGAACAACTGACGGACACGTGCAAACTGC
ATCTCCTCAGATGCACTACTGCTCCAACTGCAATGGACACCATTCAAGTT
CTAGGAGCGAACGAAATTGTGCTACGCTACTGCAGACGTATGCCCGGCTG
TTCGCGATTGCGACTACTGACAGTCCCTGTCAGGGTAATCGAATCCCTGA
CATCTGGATCACACCTTATTTCTCTCCGGACCGTCATCTTTATGGTCTTC
AAGCCTGACCTTATTCCTGAGGCAATCATGGCGTTCCATTCCAGTTGGGC
CTGTAACCCATTGTAAAAAACGG
FMO02818.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dally-RB | 4483 | CG4974-RB | 729..1806 | 38..1100 | 4930 | 98.1 | Plus |
| dally-RA | 3444 | CG4974-RA | 729..1806 | 38..1100 | 4930 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8886497..8886948 | 577..1026 | 2055 | 98 | Plus |
| 3L | 28110227 | 3L | 8828233..8828504 | 38..309 | 1360 | 100 | Plus |
| 3L | 28110227 | 3L | 8877156..8877303 | 307..454 | 740 | 100 | Plus |
| 3L | 28110227 | 3L | 8886275..8886398 | 453..576 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:44:28 has no hits.
FMO02818.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:01 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:34 Download gff for
FMO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dally-RA | 721..1719 | 30..1026 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:28 Download gff for
FMO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dally-RA | 721..1719 | 30..1026 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:28 Download gff for
FMO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8828225..8828503 | 30..308 | 98 | -> | Plus |
| 3L | 8877158..8877301 | 309..452 | 100 | -> | Plus |
| 3L | 8886275..8886398 | 453..576 | 100 | -> | Plus |
| 3L | 8886497..8886948 | 577..1026 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:34 Download gff for
FMO02818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8821325..8821603 | 30..308 | 98 | -> | Plus |
| arm_3L | 8870258..8870401 | 309..452 | 100 | -> | Plus |
| arm_3L | 8879375..8879498 | 453..576 | 100 | -> | Plus |
| arm_3L | 8879597..8880048 | 577..1026 | 98 | == | Plus |
