FMO02824.5prime Sequence
1219 bp (1055 high quality bases) assembled on 2008-06-10
> FMO02824.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGCAGGTCTGCGAGG
AGGCACTCAAGGTCTTGAGGCAATCCCGTCGTCGTCCTGTCCGCGGATTA
CTTCATGTCAGCGGAGACGGCCTGCGAGTGGTGGACGACGAGACCAAGGG
CCTGATAGTGGACCAGACCATCGAGAAGGTCAGCTTCTGTGCACCGGATC
GCAATCACGAACGCGGCTTCAGCTACATATGCCGGGATGGAACCACTCGT
CGCTGGATGTGTCACGGCTTCCTGGCGTGCAAGGACTCCGGCGAGCGATT
GTCCCATGCCGTTGGCTGTGCTTTTGCCGTTTGTCTGGAGCGAAAGCAGC
GACGCGACAAGGAGTGCGGCGTGACAATGACCTTCGACACGAAGAACTCG
ACCTTCACGCGGACCGGATCCTTCCGTCAGCAGACGTTGACGGAGCGTCT
GGCAATGGCCACAGTGGGCACAAATGAGCGGAGCGTAGATGGGCCGGGAT
CAGCAATGCCGGGTCCTCCGGCGGCCACCGTCAAGCCTTTCAATCCCTTC
GCCATCGAACGGCCCCATGCCACGCCCAACATGCTGGAGCGTCAGAGTTC
GTTCCGTTTGAGCACGATTGGCAGTCAGTCGCCGTTCAAGCGCCAGATGT
CACTGCGCATCAACGATCTTCCGTCCAATGCCGATCGTCAGAGGGCCTTC
CTGACCGCCGCCGCTGGCAATCCAATGCAGACGCCACTGCGAAGTGTTTC
TCCCATTGCCGAGGTCTCGCCGGCCAAGTCTGCTGGAGCGGATCCGTTGT
CAGCTGCCGCTGTAGCCGCCGATTCTGTGAGCCAACTGTGTCAGGAGCTC
AGCCAGGGTCTCTCGCTCTTGACCCAGACAGACGCCCTATTAGCCGCCGG
CGAGGATCTAAACTTCAACAACAATCGCAGCATTAATCAGAACATCATTG
CCGCCGAGAGCAGTGCAACATGTACACTCATATGCCCCGCCGACGGCACA
AGTGACGCCTCGAGTGGACAGCACCACGCCCACATATCAGACGCCTCCAT
TCGCAGTCCGCCCTCGCGATCGGAGCAGGAGCATCGAACCCTCGACGGAA
CTGCCAAATGCCGGCAATGGCTGATCATGGTGGTGGCAGTACGTCTCGCA
CACACCGACGGTCCATATTTGCCAGTTGGCCAGACTCTAAAACCTGACCA
AGTGACACTGTGGGCTATG
FMO02824.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 4395 | CG3779-RD | 1112..2226 | 34..1147 | 5310 | 98.8 | Plus |
| numb-RB | 2956 | CG3779-RB | 734..1848 | 34..1147 | 5310 | 98.8 | Plus |
| numb-RA | 3309 | CG3779-RA | 1087..2201 | 34..1147 | 5310 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9460937..9461990 | 70..1123 | 4940 | 99.1 | Plus |
| 2L | 23513712 | 2L | 9460717..9460753 | 34..70 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:07:53 has no hits.
FMO02824.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-06-10 14:37:25 Download gff for
FMO02824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3779-RB | 687..1816 | 31..1158 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:26 Download gff for
FMO02824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1084..2213 | 31..1158 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:42 Download gff for
FMO02824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 1084..2213 | 31..1158 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:42 Download gff for
FMO02824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9460714..9460753 | 31..70 | 97 | -> | Plus |
| 2L | 9460938..9462027 | 71..1158 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:26 Download gff for
FMO02824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9460714..9460753 | 31..70 | 97 | -> | Plus |
| arm_2L | 9460938..9462027 | 71..1158 | 98 | | Plus |
